Janthinobacterium rivuli: P9875_09105
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Entry
P9875_09105 CDS
T09016
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
P9875_09105 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jri03019
]
P9875_09105 (orn)
03009 Ribosome biogenesis [BR:
jri03009
]
P9875_09105 (orn)
Messenger RNA biogenesis [BR:
jri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P9875_09105 (orn)
Ribosome biogenesis [BR:
jri03009
]
Eukaryotic type
Pre-60S particles
RNases
P9875_09105 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
WFR81303
UniProt:
A0ABY8I8Q5
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All DBs
Position
2006183..2006791
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AA seq
202 aa
AA seq
DB search
MSQATDLSAPTSASTPAPTVPARPNEMNLVWVDMEMTGLEPDTDRIIEVAVVVTDMHLNL
LAEGPVFVIHQSDETLNKMDAWNKGTHGRSGLIDKVKASTVTEAQAEAELIAFLKKYVPA
GKSPMCGNTIGQDRRFMVRGMPKLEAFFHYRNVDVSTLKELCKRWKPEIATGFKKHQKHT
ALADILESVEELKYYREHFIKL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagcgaccgacttatctgcacccacctctgcatccactcccgcacccacggtg
ccggcacgtccaaacgagatgaacctggtctgggtcgacatggaaatgacgggcctggag
cccgataccgaccgcatcatcgaggtggcggtggtggtgacggacatgcacttgaacctg
ctggccgaaggccccgtgttcgtgattcaccagtcggatgaaaccctgaacaagatggat
gcctggaacaagggcacgcacggccgctcgggcctgatcgacaaggtgaaagcgtcgacc
gtgacggaagcgcaggcggaggcggaactgatcgcgttcctgaagaaatacgtaccggca
ggcaagtcgcccatgtgcggcaacaccatcggccaggaccgccgcttcatggtgcgcggc
atgccgaagctggaagcgttcttccactatcgcaatgtcgacgtatcgacactcaaagaa
ctgtgcaagcgctggaagcctgaaatcgccaccggtttcaagaagcaccagaagcacacg
gcgctggccgatattctggaatcggtcgaagagctgaaatactaccgcgagcacttcatt
aaattgtaa
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