Janthinobacterium rivuli: P9875_09880
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Entry
P9875_09880 CDS
T09016
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jri03016
]
P9875_09880
Enzymes [BR:
jri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
P9875_09880
Transfer RNA biogenesis [BR:
jri03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
P9875_09880
Prokaryotic type
P9875_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WFR81447
LinkDB
All DBs
Position
complement(2150363..2151340)
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AA seq
325 aa
AA seq
DB search
MFKLTFLGTSSGVPTRHRNVTSLALQTTHNRDWWMIDCGEATQHRLQRIPLSVHDLVGIC
ITHVHGDHSYGLPGLLASASMTGRKKPLLLIAPAAIKAWIDATLLHTELFLTYPLIHIDV
DSAPVVHEEAGLTISRHALSHRAPSVGYRFALETSRWKLDKPALLAAGVPPGPAWGQLQA
GQDAILNDGTVLAAGAFRQTDTQRATVVIGGDNDTPALLTDACAGAQLLVHEATYTEAML
QKVGPGPTHSSVQRVAQFAEAVRLPNLILTHFSARYHHAEGMAELEAEARLHYSGELFLA
RDFDSYELDAAGVLSKLPAKKSSGD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaactgacttttctcggcacgtcttccggcgtgcccacgcgccaccgcaacgtc
acgtcgctggccctgcaaaccacgcacaaccgcgactggtggatgatcgattgcggcgaa
gcgacgcagcaccggctgcagcgcatccccctgtccgtgcacgacctggtgggcatttgc
atcacccatgtgcatggcgaccacagctatgggttgccgggcctgctggccagcgcctcc
atgacggggcgcaagaagcccttgctgctgatcgccccggccgccatcaaggcctggatc
gacgccaccctgctgcacacggaactgttcctgacgtatccgctgatccacatcgacgtg
gacagcgcgccagtcgtgcatgaggaagcgggcttgaccatctcacgccatgcgctgtcg
caccgtgcgccgagcgtgggctatcgttttgcgctggaaacgagccggtggaagctggac
aaaccggccttgctggcggccggcgtgccgcccggtcccgcctggggacagttgcaagcg
ggccaggatgcgatcctgaacgatggcacggtactggcggccggcgctttccgccagacg
gacacgcagcgcgccacggtagtgatcggcggcgacaacgacacgccagcgttgctgacg
gacgcctgtgccggcgcgcaattgctcgtgcatgaagccacctacacggaagcgatgttg
cagaaagtggggcccggccccacgcacagctccgtgcagcgcgtggcgcagttcgccgaa
gcggtgcgcttgccgaacctgatcctcacccacttcagcgcccgctatcaccatgcggaa
ggcatggccgagctggaagcggaggcccggctgcattactcgggcgaactattcctcgca
cgcgatttcgacagctatgaactcgatgcggccggtgtgctgagcaagctgccggcaaag
aaatctagtggggattga
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