Janthinobacterium rivuli: P9875_11375
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Entry
P9875_11375 CDS
T09016
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_11375
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P9875_11375
Archaeal homologous recombinant proteins
P9875_11375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WFR81713
LinkDB
All DBs
Position
complement(2469273..2470499)
Genome browser
AA seq
408 aa
AA seq
DB search
MRLLHTSDWHLGQTLHNFERGYEHQRFLDWLLDTLVAEQADVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPALQLVVVAGNHDSAGRLEAPGPLLAAHGTHVIGHLLRGEAGNIDL
ERLLLPLAGADGQVQAWCLAVPFLRPGDVPKLPAGDTQDAYLGGIALLYRQLTDLALARR
QPGQAILAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDAAIAYAALGHLHKAQAVGG
QEHIRYCGSPIPLSFAEVNYRHQVLCLDIDGEALQSVRAIEVPRAVPLLRVPATPAPINE
VLAQLAALDVPAAPAEAQPFLEVRVRLDAPEPGLRTRIETALDGKPVRLAKIETSSAARS
SAPENMTLDQLGQLQPDDIFRRLYLQKYGKEAPPEQLSALAELLLPGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacttccgactggcatctgggccagaccctgcacaattttgaaagg
ggctacgagcaccagcgcttcctcgactggctgctcgacacgctcgtcgccgaacaggcc
gacgtgctgctggtggcgggcgacgtgttcgacaacgccaacccgtcggccgcctcgcaa
aagcagttatatgtcttcctgcagcaggcgcgcgcgcgcctgcccgcgctgcaactggtc
gtcgtcgccggcaaccacgattcggcggggcggctggaagcgcccggccccctgctggcc
gcgcatggcacgcacgtgattggccatctgctgcgcggcgaggcaggcaatatcgacctg
gaacgcctgctgctgcctttggcgggcgccgacgggcaagtgcaagcctggtgcctggcc
gtgccctttttgcgccccggcgacgtgccgaaactgccggccggcgatacgcaggatgcc
tacctgggcggcatcgccctgctgtaccggcaattgacggacctggcgctggcgcgccgc
cagcccggccaagccatccttgccatgggccactgccacatggtgggcggcgaaatgtcg
aacgattccgagcgccgcatcgtcatcggcggcacggagatgctgccgtcggggattttt
gacgccgccatcgcgtatgcggcgctgggccatttgcacaaggcgcaggccgtgggcggc
caggagcacatccgctactgcggcagcccgattcccctgtccttcgcggaggtgaactac
cgccaccaggtgctgtgcctcgacatcgacggcgaagcgctgcagtccgtgcgcgccatc
gaagtgccgcgcgccgtacccctgctgcgcgtgcccgccacgccggcgcccatcaacgag
gtactggcgcagctggccgccctcgacgtgcccgccgcgccagccgaagcgcagcccttc
ctggaagtgcgcgtgcgcctcgatgcgccggaaccgggcctgcgcacgcgcatcgaaacg
gcgctcgacggcaagcccgtgcgcctggcgaagatcgaaacgtcgagcgccgcgcgcagc
agcgcgcccgagaacatgacgctagaccaattgggccagctgcagcccgacgacatcttc
cgccgcctgtacctgcaaaaatatggcaaggaagcgccacccgaacaactgtcggccctg
gccgaactgctgctgcccggcgcgtga
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