KEGG   Janthinobacterium rivuli: P9875_13270
Entry
P9875_13270       CDS       T09016                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
jri  Janthinobacterium rivuli
Pathway
jri03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    P9875_13270 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jri03400]
    P9875_13270 (recB)
Enzymes [BR:jri01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     P9875_13270 (recB)
DNA repair and recombination proteins [BR:jri03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     P9875_13270 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C UvrD_C_2 AAA_19 PDDEXK_1
Other DBs
NCBI-ProteinID: WFR82068
LinkDB
Position
2886749..2890417
AA seq 1222 aa
MTSHLLNPLAFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGVGHGGEGTAFTRPLLPA
DILVMTFTRAATRELSNRVRERLIEAAAYFRHESGGSDPFLDALLESYPDESERQKAAHR
LMLAAETMDEAAIFTIDAWCQRMLREHAFDSGSLFDEELVSDEQALFEDAAHDYWRQQVY
PLPPQALDVLLACWPDVGALKKGARELARRADIMGMADEEPLSMLIAREQRALAAQLATL
KAGWVERVDRMAVWINDHRAANPKCFNGVKMKPENLAKWFDGLRKWAQDPLLLLPAITAK
AWERLTPFGIEDAFAKSFTAQVPECFEHTEALGIALAGITPLAHKLHLHAAAAIARRMDQ
LKRQSRQFGFADMLQRLHDALAGENGAALRQRIIDQYPLAMVDEFQDTAPAQYRIFNLLY
RIADNDPALGLFLIGDPKQSIYGFRGADIQSYLAARRATTGRHYQLGTNYRSTAPLVAAV
NQLFLHAEREEVPAGAFRYRKNGENPLPFEAVDAKGRAEHLVNASGPLPALMAACASDEG
LRGDSYREYFAQHCAEHIVAMLGDAQAGFTGPDGFTRLQPADVAILVRDRKEAAAIRRAL
ARRRVASVYLSDKDSVVDSEEAQDVLRWLAALANPLDGGLARAAFATRTIGLSLGELARL
SSDELEWERRVEQLKALHLIWQRQGVLAMLRRFIHELQLPAMLLQQTGGERRLTNLLHLA
ELLQSASRQLDGEQALIRWLAEQIAGEGEGGDERVLRLESDAELVKVITVHKSKGLEYPL
VYLPFSVTARKVDKRNRSFFEYAGEDGERRLDLSLSDEAMAAVEEARIEEDLRLLYVALT
RARHFLWLGVAAQAARKAGDNTLHESALGYLLTGGDKLPFDQLLLRWQQVAGSCDAIYVG
SLAQPDACTVLDRVERRPELRPAPVFAGEFERDWSVGSFTSLTRQIGAVTAAHVPQRALE
ETLLEDGTAVAVATPMHMGDAPWHRFPRGSVPGNFLHEQLEWMGGEGFDCVHDDNFNTRL
AARCERAGWGHRQDDAIAWLREIAITPLPLLDASLSQLNSTLSEMEFWFPSEHLSTAALD
QLCTRLLLDGAPRPVLPRRQLHGMLKGFADLVIEQDGRYWVLDYKSNALGANDAAYHTQA
LAAGMAQHRYDIQGAIYMLALHRLLKSRMGDAYDPAEHLGGAIFLFLRGIANADTHGCYW
LAPQLELLDGLDQLLSEEVEIA
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgacgagccatctgctcaaccccctggcgttcccgctgcacggctcgcgcctgatcgaa
gcgtccgccggcaccggtaaaacctggaccatcgccgcgctgtacgtgcggctagtactt
ggtcacggcgtgggccacggcggcgaaggcacggcttttacccgtcccctgctgccggcc
gatattttggtgatgacgtttacccgcgccgccacgcgcgaattgtcgaaccgcgtgcgc
gagcgcctgatcgaggcggccgcatatttccgccacgagtctggcggcagcgacccgttt
ctcgacgccttgctcgagtcctatccggatgagagcgagcggcaaaaggccgcgcaccgg
ctgatgctcgctgccgagacgatggatgaagcggccattttcaccatcgacgcgtggtgc
cagcgcatgctgcgcgagcatgcgttcgacagcggcagcctgttcgacgaagaactggtc
agcgacgagcaagccctgttcgaggatgccgcccacgattactggcgccagcaagtctat
cccttgccgccgcaggcgctcgacgtgctgctggcctgctggcccgacgtgggggcgctg
aagaaaggcgcgcgcgagctggcgcgccgcgccgacatcatgggcatggcggacgaagaa
ccgttatccatgctgatcgcgcgcgaacagcgggcgctggccgcgcagctggccaccctg
aaggcgggttgggtcgagcgcgtcgaccggatggccgtgtggatcaacgaccaccgtgcc
gccaatcccaagtgttttaacggcgtcaagatgaagccggagaacctggcgaagtggttc
gacggcttgcgcaagtgggcgcaggatccgctgttgctgctgccggccatcacggccaag
gcgtgggagcgattgacgccgttcggcatcgaggatgcgtttgccaagagtttcacggcg
caggtgcccgaatgcttcgagcatacggaggcgttggggatcgccctggcgggtatcacg
ccgctggcgcacaagctgcacctgcatgcggcggcggccatcgcgcggcgcatggaccag
ttgaagcgccagtcgcgccagttcggctttgccgacatgctgcagcgattgcacgacgcg
ctggctggcgaaaatggcgcggccctgcgccagcgcatcatcgaccagtatccgctggcc
atggtcgatgaattccaggatacggcgccggcccagtaccggattttcaacctgctgtac
cgcatcgccgacaacgatccggccctgggcctgttcctgatcggcgacccgaaacagtcg
atctacggctttcgcggcgccgacatccagagctacctggcggcgcgccgcgcgacaacg
ggacgccattaccagctgggtaccaattaccgttccacggcgccgctggtggcggccgtc
aaccagctgttcctgcacgccgagcgcgaggaggtgccggctggcgccttccgctaccgc
aaaaacggcgagaatccgctgccgttcgaggccgtcgacgccaagggccgcgccgagcac
ctggtgaacgccagcggcccgctgcctgccctgatggccgcctgcgccagcgatgaaggg
ctgcgcggcgacagctaccgcgagtatttcgcgcagcactgcgccgaacatatcgtcgcc
atgctgggcgatgcgcaagctggttttactggcccggacggttttacgcgcctgcagccg
gccgatgtcgccatcctcgtgcgcgaccgcaaggaggcggcagccatccgccgcgcgctg
gcgcgccgccgggtcgccagcgtctacctgtccgacaaggattccgtcgtcgacagcgag
gaagcgcaagacgtgctgcgctggctggcggcgctggccaacccgctcgacggggggctg
gcgcgcgccgcctttgccacgcgcaccattggcctgtcgctgggcgaactggcgcgcctg
tcgagcgatgaactggaatgggagcgccgggtcgagcaactgaaggccttgcatttgatc
tggcagcgccagggcgtgctggccatgctgcgccgcttcatccacgaactgcagttgccg
gccatgctgctgcagcagacgggcggcgagcggcgcttgacgaatctgctgcacctggcc
gaactgctgcaatcggccagccgccagcttgatggcgagcaggcgctgatacgctggctg
gccgagcagatcgccggcgaaggcgagggcggcgacgaacgcgtgctgcgcctggaaagc
gatgcggagctggtgaaagtcatcacggtgcacaaatccaagggactcgaatatccgctc
gtgtatctgccgttttccgtcacggcgcgcaaggtggacaaacgcaaccgcagcttcttc
gagtacgcgggcgaggatggcgaacgccgcctcgacttgtccttgtccgacgaagccatg
gcggccgtcgaagaagcacgtatcgaggaagacttgcgcctgctgtacgtggcgctgacg
cgcgcgcgccacttcctgtggctgggcgtggccgcccaggcggcgcgcaaggcgggcgat
aacaccttgcacgaatcggcgctcggctacctgctgacgggcggcgacaagctgccgttc
gaccagctgctgttgcgctggcagcaggtggcgggcagttgcgacgccatctacgtgggt
tctttggcgcagcccgacgcctgcacggtgctggaccgcgtcgagcggcgtcccgagctg
cgtcccgcccccgtgttcgcgggcgaattcgaacgcgactggtcggtgggcagcttcacg
tcgctgacgcgccagatcggcgccgtgacggccgcgcacgtgccgcagcgggcgctggaa
gaaaccttgctggaagatggcacggcggtggccgtggccacgccgatgcacatgggcgac
gcgccctggcaccgcttcccgcgcggttccgtgcccggcaatttcctgcacgagcagctc
gaatggatgggcggcgagggttttgactgcgtccacgacgacaatttcaatacccgcctg
gccgcgcgctgcgagcgggcgggctggggccaccgccaggacgacgccatcgcctggctg
cgcgagatcgccatcacgccgctgccgctgctcgatgcctcgctgtcgcagcttaatagc
accctgtccgagatggagttctggttccccagcgagcatttgtccacggcggcgctcgat
cagctgtgcacgcgcttgctgctcgacggcgcgccgcgtcccgtgctgccgcggcgccag
ctgcacggcatgctgaaaggctttgccgacctggtcatcgaacaagatggccgctactgg
gtgctcgactacaagtcgaatgcgctgggcgccaacgacgctgcctatcacacgcaggca
ctggcggccggcatggcgcagcaccgctacgatatccagggcgccatctacatgctggcc
ctgcaccggctgctgaaaagccgcatgggcgacgcgtatgacccggccgagcacctgggc
ggcgccatcttcctgttcctgcgcggcatagcgaatgcggacacgcatggctgctattgg
ctggcgccgcagctggaactgctggacggcctcgatcaattattgtcagaagaagtggaa
atagcatga

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