Janthinobacterium rivuli: P9875_14705
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Entry
P9875_14705 CDS
T09016
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jri03032
]
P9875_14705
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_14705
Enzymes [BR:
jri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P9875_14705
DNA replication proteins [BR:
jri03032
]
Prokaryotic type
DNA Topoisomerases
P9875_14705
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P9875_14705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
WFR76980
LinkDB
All DBs
Position
complement(3242296..3243393)
Genome browser
AA seq
365 aa
AA seq
DB search
MEISATTTARAAGLRYTGDHQSGIARLGKPGKFRYRDTDGHILRDAATLARIKALAIPPA
WTDVWICPHANGHLQATGRDARGRKQYRYHARWRQVRDEVKYERMLSFGRALPAIRAAVA
RGMQLPGLPREKVLATIVHLLELTMMRIGNEEYARTNKTFGLTTLRTRHVQVDGSAVAFH
FKGKSGVRHDIRLSDRRLARVLQRMRELPGQELFQYVDEDGARHGVDSGDVNDYLREVTG
EDYTAKDFRTWSGTLLAALALQAFEQVDSDAQAKKNIVQAIESVAKKLGNTPTICRKCYV
HPAVLESYLDGSLLEGMRARARQQMQDDLQALAPEEAAVLALLQQRLQGALKPGARAAAG
SVPTV
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatccgccaccaccacggcccgcgcggccggcctgcgctacacgggcgaccat
caaagcggcatcgccagattgggcaagcccggcaagttccgctaccgcgacacggacggc
catatcctgcgcgatgccgccaccctggcgcgcatcaaggcgctggccataccgccggcc
tggacggacgtgtggatctgcccgcacgccaacggccacctgcaggcgacgggacgcgac
gcgcgcggccgcaaacagtaccgctaccacgcgcgctggcgccaggtgcgcgacgaagtg
aaatacgagcgcatgctcagctttggccgcgccctgcccgccatccgcgccgccgtcgcg
cgcggcatgcagttgccgggtttgccccgtgaaaaagtgctggccaccatcgtccacctg
ctggaattgacgatgatgcgcatcggcaatgaagaatacgcgcgcacgaacaaaacgttc
ggcctgaccaccctgcgcacgcgccatgtgcaggtcgacggcagcgccgtggcctttcac
ttcaagggcaagagcggcgtgcgccacgatatccgcctgagcgaccggcgcctggccagg
gtgctgcagcgcatgcgcgaactgccgggccaggaactgtttcaatatgtcgatgaggac
ggtgcgcgccatggcgtcgattcgggcgacgtcaacgactacctgcgcgaggtgacgggc
gaagactacacggccaaggatttccgcacctggtccggcaccctgctggccgcgctggcc
ctgcaggcgttcgaacaggtcgattccgatgcgcaagcgaagaaaaacatcgtgcaggcg
atcgagtccgtggcgaaaaagctgggcaacacgccgacgatctgccgcaagtgctatgtg
cacccggccgtgctggaatcgtatctggatggcagtttattggaaggcatgcgcgcgcgg
gcgcggcagcagatgcaggacgatttacaggcgctggcgccggaggaagcggccgtgctg
gccttgctgcagcagcggctgcagggtgcgctcaagcctggcgcgcgggctgcggctggc
agcgtaccgacagtgtga
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