Janthinobacterium rivuli: P9875_14900
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Entry
P9875_14900 CDS
T09016
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03030
DNA replication
jri03430
Mismatch repair
jri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P9875_14900
03430 Mismatch repair
P9875_14900
03440 Homologous recombination
P9875_14900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jri03032
]
P9875_14900
03400 DNA repair and recombination proteins [BR:
jri03400
]
P9875_14900
Enzymes [BR:
jri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P9875_14900
DNA replication proteins [BR:
jri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P9875_14900
DNA repair and recombination proteins [BR:
jri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P9875_14900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WFR77017
UniProt:
A0ABY8HZ72
LinkDB
All DBs
Position
3282235..3282864
Genome browser
AA seq
209 aa
AA seq
DB search
MNVFDKPIVMIDFETTGLSPDMGDRITEVAALRIEGGRITDRYVTLINCNARIPSFITGL
TGITQAMVDKAPPVAEVVPQLLDFIGSDALSAHNASFDEKFLRAESARLNLTPAHQSLVC
SLKLSRRVFPGMASYKLGLLSSQLGIAFKSAAHRAESDAEVAAQVLIHIGRHLRSSYGIA
DVDADLLVSLNKLAAAKVPQFLQKHPSRR
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtttgacaaaccgatcgtcatgatcgacttcgagacgaccggattgtcgccc
gacatgggcgaccgcatcacggaagtggcggcgcttcgcatcgagggcgggcggatcacg
gaccgctatgtgaccctgatcaactgcaatgcgcgcattccctcgttcatcacgggcttg
acgggcatcacgcaggccatggtggacaaggcgccgcccgtggccgaggtggtgccgcag
ttgctggattttatcggcagcgatgccttgtcggcgcacaatgccagcttcgatgaaaaa
ttcctgcgcgcggaaagcgccaggctgaacctgacaccggcgcaccagtcgctcgtgtgt
tccttgaaactgtcgcgccgcgtgtttcctggaatggccagctacaagctgggcttgctc
tcgagccagctgggcatcgccttcaagagcgccgcccacagggccgagtccgatgcggaa
gtggcggcgcaagtgctgatccatatcggccgccatttgcgcagcagctatggcatcgcc
gatgttgacgccgacctgctggtgtcgctgaacaagctggccgccgccaaagtgccgcaa
ttcctgcaaaaacacccatcgcgccgctga
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