Janthinobacterium rivuli: P9875_21450
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Entry
P9875_21450 CDS
T09016
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9875_21450 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jri03019
]
P9875_21450 (pnp)
03016 Transfer RNA biogenesis [BR:
jri03016
]
P9875_21450 (pnp)
Enzymes [BR:
jri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
P9875_21450 (pnp)
Messenger RNA biogenesis [BR:
jri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P9875_21450 (pnp)
Transfer RNA biogenesis [BR:
jri03016
]
Prokaryotic type
tRNA degradation factors
P9875_21450 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
OB_RRP5_4th
DUF5813
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WFR78255
UniProt:
A0ABY8I043
LinkDB
All DBs
Position
complement(4720172..4722289)
Genome browser
AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFNGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANTKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAAAGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggtcaacaccaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtggtggcacgcaaagatgccaagccaggccaggatttcttccctttgacg
gttgattatgttgagaaaacctatgctgccggtaaaatcccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcccgtctgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcatcggccgccctgtgcgta
tcgggcgtgcctttcaacggtcctatcggcgccgcgcgcgtcggttacgcgaatggccag
tacatcctgaacccgaccgtccagcaactgaaaacgtcggaaatggacctggttgtcgcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtcttcggccacgaccagatgaaagtcgtcatcgacgcgattcac
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gcactgatcgcccgcgtcgcgcatttcgccaacaccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcagcgacgtcggaagtgatcgccgac
ctgtcggccgaagcggctgccgccggcggcgcatcgatcgacagcgcggaagtgaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcctggacggcgagccacgt
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgatccgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtggcaacg
ttgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccaccggcgaaacgggccgtgtcggtacg
ccaaaacgccgcgaaatcggccatggccgcctggccaagcgcgcgctgatcgccgccctg
ccggcagctgaagagttcagctactcggtgcgcctggtatcggaaatcacggaatcgaac
ggttcctcgtcgatggcatcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaagaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacattctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
attcgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgttgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtagaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaagacggcttgctgcacatctcgcagatcgcc
aacgagcgcgtcaacgccgtggccgactacctgaaagaaggccagctggtgcgtgtaaaa
gttctggaaacggacgaccgcggccgcctgaaactgtcgatgaaagctgctgaaggcaac
gaagcgccagccgcttaa
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