KEGG   Janthinobacterium rivuli: P9875_21840
Entry
P9875_21840       CDS       T09016                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
jri  Janthinobacterium rivuli
Pathway
jri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    P9875_21840 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jri03400]
    P9875_21840 (uvrB)
DNA repair and recombination proteins [BR:jri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     P9875_21840 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      P9875_21840 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 Kinesin P-loop_SecA FPRL1_inhibitor
Other DBs
NCBI-ProteinID: WFR78323
UniProt: A0ABY8I2H7
LinkDB
Position
4796513..4798606
AA seq 697 aa
MPELSTASEAESAIISFPDSPFKLHQPFPPAGDQPTAIDQLSEGIADGLAFQTLLGVTGS
GKTYTMANVIARMGRPAIVFAPNKTLAAQLYSEFRDFFPQNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSSINEHIEQMRLSCTKSLMERRDVIIVATVSAIYGIGNPNEYHQMILTLRV
KDRVAQRDVIARLIQMQYTRNEVDFGRGTFRVRGDTIDIFPAEHAELAVRLEMFDDEIES
IQLFDPLTGRVRQKIPRFTVYPGSHYVTPRSTVLRAVETIKDELRERLEFFRKENKLIEE
QRLEQRTRFDLEMMAEIGFTKGIENYSRHLSGALPGEPPPTLVDYLPPDALMFLDESHVL
TGQLSAMYNGDRSRKTNLVDYGFRLPSALDNRPLKFEEFEQKMRQTVFVSATPAEYEKTH
SDQVVEQVVRPTGLVDPQIIVRPASSQVDDLMSEIVERIKKDERVLVTTLTKRMSEQLTE
YLGDHGIKVRYLHSDIETVERVEILRDLRLGTFDVLVGINLLREGLDLPEVSLVAILDAD
KEGFLRSERSLIQTIGRAARNLNGTAILYGDRITDSMRRAIDETERRRNKQIAFNTANNI
VPIGVKKSIREMIDGVYSPQEARENLQVAQEAAKFESMSEKQVSKEIKRLEKLMVDHAKN
LEFEKAAQVRDQLHILKQQLFGAPGTDNVTSILGRSD
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgcccgaattatctaccgccagcgaggcggaaagcgcaattatctctttcccggactcc
cccttcaagctgcaccagcccttccctccggccggcgatcagcccacggcgatcgaccag
ttatccgaggggatcgccgacggactggccttccagaccctgctgggcgtgaccggttcg
ggcaagacctacaccatggccaacgtcatcgcgcgcatgggccggcccgccatcgtcttc
gcgccgaacaagacgctggccgcgcagctgtacagcgagttccgcgactttttcccgcaa
aacgcggtcgaatacttcgtcagctactacgattactaccagcccgaagcctacgtgccg
cagcgcgacctgttcatcgaaaaggactcgtcgatcaacgagcatatcgagcagatgcgc
ctgtcgtgcaccaagtcgctgatggaacggcgcgacgtcatcatcgtcgccaccgtctcg
gccatctacggtatcggtaacccgaacgaataccaccagatgatcctgacgttgcgcgta
aaagacagggtcgcccagcgcgacgtcatcgcgcgcctgatccagatgcagtacacgcgc
aacgaagtcgatttcggccgcggcaccttccgcgtgcgcggcgataccatcgacatcttc
cccgccgagcatgcggaactggccgtgcgcctggaaatgttcgacgacgagatcgaatcg
atccagctgttcgacccgctgacgggcagagtgcgccagaaaatcccgcgcttcaccgtg
tatccgggctcgcactatgtgacgccccgctccaccgtgctgcgcgccgtggaaaccatc
aaggacgagctgcgcgagcgcctcgaattcttccgcaaggagaacaagctgatcgaggag
cagcggctggagcagcgcacgcgcttcgacctggaaatgatggccgaaatcggttttacc
aagggcatcgagaactactcgcgccatttgagcggcgcgctgccgggcgaaccgccgccg
accctggtcgattacctgccgcccgacgcattgatgttcctcgacgagtcgcacgtgctg
acgggccagctgagcgccatgtacaacggcgaccgctcgcgcaagacgaacctggtcgac
tatggtttccgcctgccgtcggcgctcgacaaccggcccttgaaattcgaggaattcgag
cagaagatgcgccagaccgtgttcgtctcggccacgccggccgaatacgaaaagacgcat
tccgaccaggtggtcgaacaggtcgtgcgtcccacgggcctggtcgacccgcagatcatc
gtgcgcccggccagcagccaggtggacgacctgatgtcggaaatcgtcgagcgcatcaag
aaggacgagcgcgtgctggtgacgaccttgaccaagcgcatgtccgagcaattgacggaa
tacctgggcgaccatggcatcaaagtgcgttacctgcacagcgatatcgaaacggtggag
cgcgtggaaatcctgcgcgacctgcgcctgggcaccttcgacgtgctggtggggatcaac
ctgctgcgcgagggcctggacttgccggaagtctccctggtcgccatcctcgacgcggac
aaggaaggctttttgcgttccgaacgcagcctgatccagaccatcggccgcgccgcgcgt
aacctgaacggcacggcgattctgtacggcgaccgcatcaccgattccatgcgccgcgcc
atcgacgagacggaacgccgccgcaacaagcagattgccttcaacacagccaataacatc
gtgccgatcggcgtgaaaaaatcgatccgcgaaatgatcgacggcgtctacagcccgcag
gaagcgcgcgaaaacctgcaagtggcgcaggaagcggcgaagttcgagtccatgagcgag
aagcaggtcagcaaggaaatcaagcgcctggaaaaactcatggtcgaccacgccaagaac
ctcgagttcgaaaaggcggcgcaagtgcgcgaccagctgcatatcctcaagcagcagctg
ttcggcgcaccgggtaccgacaatgtgacatcgatactgggtaggtcggattag

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