Janthinobacterium rivuli: P9875_22030
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Entry
P9875_22030 CDS
T09016
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jri03021
]
P9875_22030 (rpoS)
Transcription machinery [BR:
jri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9875_22030 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
Motif
Other DBs
NCBI-ProteinID:
WFR78361
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All DBs
Position
complement(4840074..4841105)
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AA seq
343 aa
AA seq
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MTHAPHDQLDDDPELPEDGADEVVTDDAGELDGIDAVDAGEGGEVASVSVLVESVDELKK
VLAAELSTDTTQHYLNQIGTRPLLTAPQEVHYATLAKQGNFEARQTMIEHNLRLVVSIAK
HYINRGVVLLDMIEEGNIGLMRAIDKFEPERGFRFSTYATWWIRQSIERAIMNQARTVRL
PVHMVRELNQILRGKYHLEAQHHDGKDATAEDIAHLVGRPVEEVQDILALSEHATSLDAP
LDNDPQSSLMDMLPGASEDGPDARAEHHEMTVLVRDWLTKLPDKQRVVIMRRFGLDNDDP
ATLETLAEEMGVTRERVRQIQQEALIKLKRAMAARGVVRDSLL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacacacgcgccgcacgaccagctggacgatgacccggaactgccggaagacggggca
gacgaagtcgtgacggacgatgcaggcgaactcgacggcattgacgccgtcgacgcgggc
gagggcggcgaggtggccagcgtcagcgtgctggtcgaaagtgtcgatgaactgaaaaaa
gtgctggcggcagagctgtcgaccgataccacgcagcactatctgaaccagattggcacg
cggcccctgctgacggcgccgcaagaggtgcattacgccaccctggccaagcagggcaat
tttgaagcccggcaaaccatgatcgagcacaatctgcgcctcgtcgtgtcgatcgcaaag
cattacatcaaccgcggcgtggtcttgctcgacatgatcgaggagggcaatatcggcctg
atgcgcgccatcgacaagttcgagcccgaacgcggtttccgcttttccacctacgccacc
tggtggatacgccagagcatcgagcgggccatcatgaatcaggcccgcacggtgcgcctg
cccgtgcacatggtgcgcgaactgaaccagattttgcgcggcaaataccacctggaagcc
cagcaccacgacggcaaggatgccaccgcggaagatatcgcccacctggtgggccgtccc
gtggaagaggtgcaggatatcctggccctgtccgagcacgccacctcgctcgacgcgccg
ctcgacaacgacccgcaatcgtccctgatggacatgctgcccggcgccagcgaggacggc
ccggacgcgcgcgcggaacaccatgaaatgacggtgctggtgcgcgactggctgaccaag
ctgcccgacaagcagcgcgtcgtcatcatgcgccgattcggcctcgacaatgacgacccg
gccaccctggaaaccctggccgaggaaatgggcgtgacgcgagagagagttcgccagatc
cagcaggaagccttgattaaactgaagcgggccatggcggcgcgtggcgtcgtgcgcgac
tcattattgtag
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