KEGG   Janthinobacterium rivuli: P9875_22080
Entry
P9875_22080       CDS       T09016                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
jri  Janthinobacterium rivuli
Pathway
jri00010  Glycolysis / Gluconeogenesis
jri00020  Citrate cycle (TCA cycle)
jri00260  Glycine, serine and threonine metabolism
jri00280  Valine, leucine and isoleucine degradation
jri00310  Lysine degradation
jri00380  Tryptophan metabolism
jri00620  Pyruvate metabolism
jri00630  Glyoxylate and dicarboxylate metabolism
jri00640  Propanoate metabolism
jri00670  One carbon pool by folate
jri00785  Lipoic acid metabolism
jri01100  Metabolic pathways
jri01110  Biosynthesis of secondary metabolites
jri01120  Microbial metabolism in diverse environments
jri01200  Carbon metabolism
jri01210  2-Oxocarboxylic acid metabolism
jri01240  Biosynthesis of cofactors
Module
jri_M00009  Citrate cycle (TCA cycle, Krebs cycle)
jri_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jri_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
jri_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:jri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    P9875_22080 (lpdA)
   00020 Citrate cycle (TCA cycle)
    P9875_22080 (lpdA)
   00620 Pyruvate metabolism
    P9875_22080 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    P9875_22080 (lpdA)
   00640 Propanoate metabolism
    P9875_22080 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    P9875_22080 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    P9875_22080 (lpdA)
   00310 Lysine degradation
    P9875_22080 (lpdA)
   00380 Tryptophan metabolism
    P9875_22080 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    P9875_22080 (lpdA)
   00670 One carbon pool by folate
    P9875_22080 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:jri04147]
    P9875_22080 (lpdA)
Enzymes [BR:jri01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     P9875_22080 (lpdA)
Exosome [BR:jri04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   P9875_22080 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored AlaDh_PNT_C FAD_binding_2 HI0933_like GIDA NAD_binding_8 3HCDH_N FAD_binding_3 UDPG_MGDP_dh_N Thi4 DAO
Other DBs
NCBI-ProteinID: WFR78369
LinkDB
Position
complement(4851502..4852932)
AA seq 476 aa
MSTKQFDVVVIGAGPGGYIAAIRAAQLGFSVACVDEWSNAKGGAAPGGTCTNVGCIPSKA
LLQSSEHFEHAGHSFAEHGIDVAGLKLNLGQMLKRKDTVVKQNNDGILYLFKKNKIAFFH
GRAAFAAAAAGAYEISVTGEANETLSAKHVVIATGSNARELPGAPFDEKLILSNTGALAI
DAVPAKLGVIGAGVIGLEMGSVWRRLGSDVTVLEGLPVFLGAVDEQIAKEASKLFTKQGL
KINLGCKIGAITPGKKDVTVEFVDAKGEAQKAVFDKLIISIGRTPNTNGLGADKVGLQLD
ERGFIAVDGDCKTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHTNFNTIPWV
IYTSPEIAWVGKTEQTLKAEGIAYKAGTFPFMANGRARALGDTSGMVKFLADATTDEILG
VHIVGPMASELISEAVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagtactaaacaatttgacgtagttgtcatcggtgcgggccctggcggctacatcgcc
gccatccgcgcagcgcagctgggcttttccgtcgcttgcgtcgacgaatggtcgaacgcc
aagggcggcgccgcgcctggcggtacctgcaccaacgtcggctgcatcccgtcgaaagcg
ctgctgcaatcgtccgagcatttcgaacacgcgggccacagcttcgccgagcacggtatc
gacgtcgccggcctgaagctgaacctgggccagatgctcaagcgcaaagacaccgtcgtc
aagcaaaacaacgacggcatcctgtacctgttcaagaagaacaagatcgccttcttccac
ggccgcgccgcttttgccgccgccgccgctggcgcgtatgagatcagcgtgacgggtgaa
gccaacgaaaccctgagcgccaagcacgtggtcatcgccacgggttcgaacgcacgcgaa
ctgccgggcgcaccattcgacgagaaactgatcctgtcgaacacgggcgcactggccatc
gacgccgtaccagccaagctgggcgtcatcggtgccggcgtgatcggcctggaaatgggc
agcgtctggcgccgcctcggttccgacgtcaccgtgctcgaaggcctgccggtcttcctg
ggcgctgtcgacgagcagatcgccaaggaagcgtcgaagctgttcaccaagcaaggcttg
aagatcaacctcggttgcaagatcggcgcgatcacgccaggcaagaaagacgtcaccgtg
gaattcgttgacgccaagggcgaagcgcaaaaagccgtgttcgacaagctgatcatctcg
atcggccgcacgccgaacacgaacggcctgggcgccgataaagtcggcctgcagctggac
gaacgcggcttcatcgccgtcgacggcgactgcaagaccaacctgccgaacgtgtgggcg
gtgggcgacgtcgtgcgcggcccgatgctggcgcacaaggccgaagaagaaggcgttgcc
gtggccgagcgtatcgccggccagcatggccacaccaacttcaacacgattccttgggtg
atctatacttcgccggaaatcgcgtgggtcggcaagaccgagcaaaccctgaaggccgaa
ggcatcgcctacaaggccggcaccttcccgttcatggccaacggccgtgcgcgcgcgctg
ggcgacacttcgggcatggtgaaattcctggccgatgcgaccaccgatgaaatcctcggc
gtgcacatcgtcggcccgatggcctccgaactgatttccgaagccgtcgtggcgatggaa
ttcaaggcctcggccgaagacatcgcgcgcatctgccacgctcacccatccctgtcggaa
gcgaccaaggaagcggcactggcggttgacaagcgcacgttgaacttttaa

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