Janthinobacterium rivuli: P9875_22130
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Entry
P9875_22130 CDS
T09016
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri00020
Citrate cycle (TCA cycle)
jri00190
Oxidative phosphorylation
jri00650
Butanoate metabolism
jri00720
Other carbon fixation pathways
jri01100
Metabolic pathways
jri01110
Biosynthesis of secondary metabolites
jri01120
Microbial metabolism in diverse environments
jri01200
Carbon metabolism
Module
jri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jri_M00149
Succinate dehydrogenase, prokaryotes
jri_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
P9875_22130 (sdhA)
00650 Butanoate metabolism
P9875_22130 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
P9875_22130 (sdhA)
00720 Other carbon fixation pathways
P9875_22130 (sdhA)
Enzymes [BR:
jri01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
P9875_22130 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
Pyr_redox_3
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
WFR78378
LinkDB
All DBs
Position
complement(4862829..4864610)
Genome browser
AA seq
593 aa
AA seq
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MAAYKSAIPTRRFDAVIVGAGGSGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMAEDNWFWHMFDTVKGGDYLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTAHFGEKPVQRACAAADRTGHALLHTLYQRNVRARTHFFVEWMALDLIRDAEG
DVIGVVALEMETGECMILEAKTTVMATGGAGRIFAASTNAFINTGDGMGMAARAGLPLQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILINSEGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDHVMLDLRHIGADTIAKRLPSILEIGHKFANVDATKEPIPVVPTIHYQ
MGGIPTNIHGQVVTPTGPDNSAKVVNGLYAIGECACVSVHGANRLGTNSLLDLVVFGRAA
GNHIVNSGLKAKENKPLPADAAEFAMGRLARLENSTGTETVQGVANDIRATMQKYCGVFR
TDEMLNKGVEEIMKLDERRKHVSFKDKSMVFNTARVEALELDNLIETAKATIVSAAARKE
SRGAHAQDDHPQRDDDNWMKHTLWYSEGNRLEYKPVVTKPLTVDTFKPKPRTF
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcatataaatctgcaatccctacccgccgctttgatgcggtcatcgttggcgcc
ggcggttccggcatgcgcgcgtcgttgcaactggctgaagccggtctgaacgtcgctgtt
ttgtcgaaagttttcccgacccgctcgcacaccgtggcggcgcagggcggtatcggcgcg
tcgctcggcaacatggccgaagacaactggttctggcacatgttcgacaccgtcaagggt
ggcgactatctgggcgaccaggatgccatcgaattcatgtgccgcgaagcaccgaaggtc
gtgtacgaactggaacacttcggcatgccattcgaccgcaaccctgacggcaccatctat
cagcgtccattcggcggccacacggcccacttcggcgaaaagccggtgcagcgcgcttgc
gcggcagccgaccgtaccggtcacgctctgttgcacaccctgtaccagcgcaacgttcgc
gcccgcacgcatttcttcgtcgaatggatggcgcttgacctgatccgtgacgccgaaggc
gacgtgatcggtgtggtcgcgctggaaatggaaaccggcgaatgcatgatcctggaagca
aaaacgacggtcatggcaacgggcggcgcaggccgcatcttcgccgcatcgacgaatgcc
ttcatcaacacgggcgacggcatgggcatggcggcacgcgccggcctgccgctgcaagac
atggaattctggcagttccacccgaccggcgtggccggtgcgggcgtattgatcaccgaa
ggcgtgcgcggcgaaggcggcatcctgatcaatagcgaaggcgaacgcttcatggagcgc
tatgcgccgaccttgaaggatctggcgccgcgcgacttcgtctcgcgttcgatggaccag
gaaatcaaggaaggccgcggctgcggtcctaacaaggatcacgtgatgctggacctgcgc
catatcggcgccgacaccatcgccaagcgcttgccgtcgattctggaaatcggccacaag
ttcgccaacgtcgacgccaccaaggaaccgattcctgtcgtgccgacgattcactaccag
atgggcggcatcccgacgaacatccatggccaggtcgtcaccccgaccggtccggataat
tcggccaaggttgtcaacggtctgtacgcgatcggcgaatgcgcctgcgtgtccgtgcac
ggcgccaaccgcctgggcacgaactcgctgctcgacctggtggtcttcggccgcgcggcc
ggtaaccacatcgtcaacagcggcctgaaagccaaggaaaacaagcctttgccagccgat
gccgccgaatttgccatgggccgcctggcgcgcctggaaaactcgaccggcacggaaacc
gtgcagggcgtggcgaacgacatccgcgcaacgatgcagaagtactgcggcgtgttccgt
accgacgagatgctgaacaagggcgtcgaagaaatcatgaagctcgacgagcgccgcaag
cacgtctccttcaaggataaatcgatggtcttcaacacggcccgcgtggaagcgctggag
ctggacaacctgatcgaaacggcgaaagcgaccatcgtttcggcggcagcgcgcaaggaa
tcgcgcggcgcccacgcccaggatgaccatccgcaacgtgacgacgacaactggatgaag
cacactctgtggtattcggaaggcaaccgactggaatacaagccagtcgtgaccaagccg
ctgacggttgataccttcaaaccgaaaccacgtactttctaa
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