Janthinobacterium rivuli: P9875_22805
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Entry
P9875_22805 CDS
T09016
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jri03016
]
P9875_22805 (truA)
Enzymes [BR:
jri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
P9875_22805 (truA)
Transfer RNA biogenesis [BR:
jri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P9875_22805 (truA)
Prokaryotic type
P9875_22805 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WFR78507
UniProt:
A0ABY8I3A9
LinkDB
All DBs
Position
complement(5028870..5029700)
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AA seq
276 aa
AA seq
DB search
MQNITTATPLKRIVLGLQYDGTAWHGYQKQEDGQTVQDQLENALEQFARVRLATTCAGRT
DTGVHALEQVVHFDTDLNRDVHSWVRGVNAFLPKSIAVRWAKELEGDPTVNDFFHARFSA
RARTYHYVLYNNATRSPLVEGRAGFFFRPLDVELMRQAVQPLLGWHDFTAFRAAQCQAKS
PVKLMHDIRIERRGDCVIFTITANAFLHHMVRNLVGSLVYIGTGREKPDWLGHLLESKDR
HAAAPTFMPDGLYLAQIDYDPKWALPQDSSSALPWF
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattacgacagcaacgccactcaagcgtatcgtcctcggcctgcagtacgac
ggcacggcctggcacggataccagaagcaggaagacgggcaaacggtgcaggaccagctg
gaaaacgcgctggagcagttcgcccgcgtgcgcctggccactacctgcgccggccgcacg
gatacgggcgtgcatgcgctcgagcaagtcgtgcatttcgatacggacctgaaccgcgac
gtgcactcgtgggtgcgcggcgtcaacgccttcctgccgaaatccattgccgtgcgctgg
gccaaggaactcgaaggcgatccgacggtcaatgactttttccacgcccgtttcagcgcc
cgcgcgcgcacttatcattatgtgttgtacaacaacgctacccgttcgccgctggtggaa
gggcgtgccggcttctttttccggccgctggacgtggaactgatgcgccaggccgtgcag
ccgctcttgggctggcacgatttcacggccttccgcgccgcgcaatgccaggccaagtcg
cctgtcaagctcatgcacgacatccgcatcgagcggcgcggtgattgcgtgatttttacg
attacggccaatgccttcctgcaccacatggtgcgcaacctggtcggttcgctcgtctac
atcggcacgggtcgggaaaagccggactggctggggcatctgctggaaagcaaggaccgc
cacgctgccgcgcccaccttcatgccggacggcctgtacctggcgcagatcgattacgat
ccgaaatgggcattgccgcaggacagcagcagcgctttgccctggttttga
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