Janthinobacterium rivuli: P9875_24005
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Entry
P9875_24005 CDS
T09016
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jri03009
]
P9875_24005
Enzymes [BR:
jri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
P9875_24005
Ribosome biogenesis [BR:
jri03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
P9875_24005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WFR78735
LinkDB
All DBs
Position
complement(5289225..5289935)
Genome browser
AA seq
236 aa
AA seq
DB search
MSKLSLDRILQSQGFGTRKYCRSLIEDGDVVIDGVTQTNYRTTVETDGLVLHVFEEEWVY
RAHLYLALNKPANFECSRKPSHHPGVLTLLPEQFTWREVQPVGRLDHDTTGMLLMSDDGP
FIHAQSSPKRHVPKIYQATTQEPVTDELVALLLAGVQLHDEPAPLAALVCVKLGEHQLEI
VLEQGKYHQVKRMLAAAGNHCSALHRSAIGSLTLESLGIAEGDWCYLTPEQIALLA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattatccctagaccgcatcctgcaatcgcagggttttggcacccgtaaatat
tgtcgttccctcatcgaggatggcgatgtcgtcatcgatggcgtcacccagaccaattac
cgcaccaccgtcgagaccgacggcctggtgctgcacgtgttcgaagaagagtgggtctac
cgcgcgcacctctacctggcgctgaacaagcccgccaacttcgaatgctcgcgcaaaccc
agccatcatcctggcgtgctgaccttgctgccggaacaattcacctggcgcgaagtccag
cccgtcggccggctcgaccacgatacgaccggcatgctgctgatgtccgacgatgggccg
tttatccatgcgcaatcgtcgccgaagcgccacgttcccaagatttaccaggctactacg
caagagcccgtgacggatgagctggtagccctgctgttggctggcgtgcaattgcatgac
gaaccggccccgctggcggccctcgtctgcgtcaagctcggcgaacaccagctggaaatc
gtgcttgaacaaggcaaataccaccaggtcaagcgcatgctggccgccgccggcaaccat
tgcagcgcgctgcaccgttccgccatcggcagcctgaccctggaatcgctgggcatcgcc
gaaggcgactggtgctatctgactcccgagcagatcgcgctgctggcctaa
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