Janthinobacterium rivuli: P9875_24720
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Entry
P9875_24720 CDS
T09016
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jri
Janthinobacterium rivuli
Pathway
jri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9875_24720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jri03021
]
P9875_24720
Transcription machinery [BR:
jri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9875_24720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_28
HTH_23
GerE
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WFR78866
UniProt:
A0ABY8I1U2
LinkDB
All DBs
Position
5443412..5443942
Genome browser
AA seq
176 aa
AA seq
DB search
MMAMPPLLSTQLESHYRAHHGWLVHWLQRRLGNAAEAADLMQDTYTRLLAGAPMQPQTPA
LRAPKAYLATVAKHLLINHLRRQSLELAWADALAALPEQHMPSTERRVEILQALQAVDAM
LDGLKPKVRAVFILAQIEGHAYADIAAQLGIGERSVKRYMAEALTECVLLAQDLPA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgatggccatgccacccctgctgtccacgcagctggaaagccattaccgcgcacaccac
ggctggctggtgcactggttgcaacggcgcctgggcaatgccgccgaggccgccgacctg
atgcaggacacctacacgcgcctgctggccggcgcgcccatgcagccgcaaacgccggcc
ctgcgcgcacccaaggcttacctggcgaccgtcgccaagcacctgctgatcaaccacctg
cgccgccagtcgctggaactcgcgtgggccgatgcgctggccgccctacccgaacagcat
atgccatcgaccgagcggcgcgtggaaatcctgcaggcgctgcaagccgtcgatgccatg
ctcgatggcctgaaaccgaaggtgcgcgccgtcttcatcctggcgcagatcgaaggccat
gcctatgcggacatcgccgcgcagctgggcatcggcgaacgctccgtgaagcgctacatg
gccgaggcgctgaccgaatgcgtgctgctggcgcaggacttgccggcatga
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