Janthinobacterium rivuli: P9875_25770
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Entry
P9875_25770 CDS
T09016
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jri
Janthinobacterium rivuli
Pathway
jri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9875_25770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jri03021
]
P9875_25770
Transcription machinery [BR:
jri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9875_25770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WFR79060
UniProt:
A0ABY8I2L9
LinkDB
All DBs
Position
5680201..5680728
Genome browser
AA seq
175 aa
AA seq
DB search
MSAIQSSLQQQVQSLYSEHHGWLVGWLRKKLSCPHGAADVAQDTFLRIIASRDALFGMRE
PRAYLSTTAKRLLLDRARRQVLERSYLAELALLADSLPGAPSPDEILMAVQALGQIATAL
DGLPAKARDAFLLHYLEEQSQAIVAAQLNVSTRMVQKYLVQALLACRHACPAMAA
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccatccagtccagcctgcaacagcaagtgcagtcgctctacagcgagcatcac
ggctggctggtcggctggctgcgcaaaaaactcagctgcccgcatggcgcggccgacgtg
gcgcaagacacctttttacgcatcatcgcctcgcgcgacgcgctgttcggcatgcgcgag
ccgcgcgcctacctgtcgacgacggcgaagcgcttgctgctcgaccgcgcgcgccggcaa
gtactcgagcgcagctatctggcggaactggccctgctggccgacagcctgcccggcgcg
ccctcgcccgacgagatcctgatggccgtgcaggcgctcgggcagatcgccacggcgctg
gacggtttgccggccaaggcgcgcgacgcctttctgttgcactacctggaagagcaatcg
caggccatcgtcgccgcgcaactgaacgtttccacgcgcatggtgcaaaaatatctggtg
caagccttgctggcctgccgccacgcctgcccggccatggcggcatga
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