Janthinobacterium rivuli: P9875_26305
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Entry
P9875_26305 CDS
T09016
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jri
Janthinobacterium rivuli
Pathway
jri02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P9875_26305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jri03021
]
P9875_26305
Transcription machinery [BR:
jri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P9875_26305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_24
HTH_10
GerE
HTH_28
HTH_38
Rv2175c_wHTH
Sigma70_r3
Xre-like-HTH
Fe_dep_repress
HTH_11
HTH_IclR
TnsD
HTH_AsnC-type
HTH_40
HTH_Tnp_ISL3
HTH_3
HTH_29
HTH_20
MarR_2
HTH_7
HTH_Mga
HTH_31
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WFR79160
UniProt:
A0ABY8I4Y9
LinkDB
All DBs
Position
complement(5793481..5793990)
Genome browser
AA seq
169 aa
AA seq
DB search
MSAADFAQQQDLHALYSSHHGWLQGWLRHKLGNAGDAADLAQDTFISVLTADAAPQIREA
RPFLATIARRLVAHRHRRQVLEDAYLEALACLPPELAPAPEERLLALEALQEIDAALDGL
PAPVRTAFLLAQLEGLSYAEIAARLNVSASSVKQYLTRANRQVFFSLPA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccgattttgcacagcaacaagacctgcacgcgctctacagcagccatcac
ggctggctgcagggctggctgcggcataagctgggcaatgcaggcgacgcggcggacctg
gcgcaagatactttcatcagcgtgctgacggccgatgccgcgccgcagatccgcgaagcg
cggcctttcctggccaccatcgcgcgccgcctggtggcgcaccgccaccgccggcaagtg
ctggaagatgcgtatctggaggcgctggcctgtctgccgcccgagctggcgcccgcgccc
gaagaacggctgctggcgctggaagccttgcaggaaatcgatgcggccctcgacggcttg
ccggcgcccgtgcgcacggcgttcctgctggcgcaactggagggcctcagctatgccgag
atcgccgcgcgcctgaacgtgtcggccagctcggtcaagcaatacctgacgcgcgccaac
cgccaggtgtttttctcgctgccggcatga
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