Janthinobacterium rivuli: P9875_27430
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Entry
P9875_27430 CDS
T09016
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jri
Janthinobacterium rivuli
Pathway
jri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P9875_27430 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jri03019
]
P9875_27430 (pcnB)
Enzymes [BR:
jri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
P9875_27430 (pcnB)
Messenger RNA biogenesis [BR:
jri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
P9875_27430 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
WFR79375
LinkDB
All DBs
Position
6044909..6046285
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AA seq
458 aa
AA seq
DB search
MIKKFIRKILGVKKEAARDTTAPIVLGPAQHGIDPKLVSSNAIRVTSSLQEAGFEAFVVG
GAVRDLLLGVKPKDFDIATNATPEQVKRLFRRAFIIGKRFQIVHVMFGQDLLEVTTFRGA
GADSAPKDEHGRVLRDNTFGLQHEDALRRDFTINAMYYNPATQEVLDYHGGVEDIRAQTL
RMIGKPEERYREDPVRMLRVVRFAAKLKFTIEPHTAAPIPIMAPLINNVPAPRVFDEMLK
LLMSGHALACLQQLRKEGLHHGLLPLLDVVLEQPLGAKFVTLALDATDQRIAAGKTVSPG
FLFASLLWHQVLEKWTAYRAAGESTIPALHLAADDVLDSQTEKLALQRKIGSDMRDIWSM
QPRFERRVGKAPYKLLEHLRFRAGYDFLLLRCASGEIDMDIGEWWTAFYEGDEETREALL
VSANAAPGAVKKKRPPRRSTRSKTSTGGGSTTGSSSGE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaattcatccgcaagatcctcggcgttaaaaaagaggcagcgcgcgacacc
acggcacccatcgtgctcggtcctgcgcaacacggaatcgacccgaaactggtgtcgtcg
aatgccatccgcgtcaccagcagcctgcaggaagcgggcttcgaggcctttgtcgtcggc
ggcgccgtgcgcgatctgctgctgggcgtgaaaccgaaagacttcgacatcgccaccaac
gccacgccggaacaggtcaagcgattgttccgccgcgccttcatcatcggcaagcgcttc
cagatcgtgcacgtgatgttcggccaggatttgctggaagtgacgaccttccgcggcgcc
ggcgccgactccgcgcccaaggatgaacatggccgcgtcctgcgcgacaacaccttcggc
ttgcagcacgaagacgcgctgcgccgcgacttcaccatcaacgccatgtactacaacccg
gccacgcaggaagtgctcgactaccacggcggcgtggaagacatccgcgcccagaccttg
cgcatgatcggcaaaccggaagagcgctaccgcgaagatcccgtgcgtatgctgcgcgtg
gtgcgcttcgccgccaagctgaaattcaccatcgagccgcacacggccgcgccgatcccc
atcatggcgccgctgatcaacaacgtgcccgccccgcgcgtgttcgatgaaatgctgaaa
ctgctgatgagcggccacgcgctggcttgcctgcagcagctgcgcaaggaaggcttgcat
cacggcctgctgccgctgctcgacgtggtgctggagcagccgctgggcgcgaaattcgtc
accctggcgctggacgccacggaccagcgcatcgcggccggcaagaccgtctcgccgggc
tttttgtttgcctcgctgctgtggcatcaggtgctggaaaaatggacggcctaccgcgcc
gccggcgagtcgaccattcccgcgctgcacctggcggccgacgacgtgctcgattcgcaa
acggaaaaactggccttgcagcgcaagatcggttccgacatgcgcgacatctggtcgatg
cagccgcgcttcgagcgccgggtcggcaaggcgccgtacaaactgctcgaacacctgcgc
ttccgcgccggctacgacttcctgctgctgcgctgcgcctcgggcgagatcgacatggac
atcggcgaatggtggacggccttttatgaaggcgacgaggaaacgcgcgaagcgctgctc
gtcagcgccaatgccgcaccgggcgccgtcaagaaaaagcgtccgccacgccgcagcacg
cgcagcaagaccagcacgggcggcggctcgaccaccggcagcagcagcggcgaataa
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