Janthinobacterium svalbardensis: CNX70_03530
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Entry
CNX70_03530 CDS
T05119
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNX70_03530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_03530
Enzymes [BR:
jsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CNX70_03530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNX70_03530
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNX70_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ATD59365
UniProt:
A0A290WR54
LinkDB
All DBs
Position
complement(813077..813913)
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AA seq
278 aa
AA seq
DB search
MPELPEVEVTRRGVAPHIEGRAVRAVVLRRDGLRWPFPPALGEQLSGQTIGLTGRRGKYL
LIHFRHGTLIIHLGMSGHLRVLPTGTEAQKHDHFDLVVEDADGGSQVLRMTDPRRFGAVL
WHDEADGPLDGHALLRGLGTEPLEGGFTGQLLFEKTRNKGTNIKQVLMAGDIVVGVGNIY
CSESLFRAGINPKTPARRIGLARYEKLAQSIRDVLAEAIVQGGSTLRDFIGVNGQSGYFQ
QTYFTYNRAGKPCRVCGATIRQIVQGQRSTFYCVNCQK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaagtcgaagtcacacggcgcggtgtcgcgccccacattgagggc
cgcgccgtgcgcgccgtcgtgctgcgccgcgacggcctgcgctggcccttccccccggcc
ctgggcgaacaattgtcggggcaaaccatcggcctgacgggacggcgcggcaaatacctg
ctgatccacttccgccacggcaccctgatcatccacctgggcatgtcgggccatttgcgc
gtgctgccgacggggacggaggcgcaaaagcacgaccatttcgacctcgtcgtggaagac
gcggacggcggcagccaggtgctgcgcatgacggacccgcgccgcttcggcgccgtgcta
tggcacgacgaggccgacggcccgctcgatggccatgcgctgctgcgcggcctgggcacg
gaaccgctggaaggcggcttcacgggccagctgctgttcgaaaaaacacgcaacaagggc
accaatatcaagcaggtactgatggcgggcgacatcgtcgtcggcgtgggcaatatctat
tgttccgaaagcctgtttcgcgcggggatcaacccgaagacgccagcccggcgcatcggc
ctggcgcgctatgaaaaactggcgcaatcgatccgcgacgtgctggccgaagccatcgtg
caaggcggcagcaccctgcgcgacttcatcggcgtgaacggccagtccggctacttccag
cagacgtatttcacgtacaaccgcgcgggcaagccatgccgcgtgtgcggcgcgactatc
cgccagatcgtgcagggacagcgttccacgttttactgcgtgaactgtcaaaagtaa
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