Janthinobacterium svalbardensis: CNX70_05545
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Entry
CNX70_05545 CDS
T05119
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
jsv
Janthinobacterium svalbardensis
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jsv03021
]
CNX70_05545 (rpoH)
Transcription machinery [BR:
jsv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNX70_05545 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ATD59709
UniProt:
A0A290WS41
LinkDB
All DBs
Position
complement(1252659..1253552)
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AA seq
297 aa
AA seq
DB search
MMSATSALVPTKSNALGLGFTGNLGNIDAYISAVNRLPMLTHDEEISLATRLREKNDLAA
AQELVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWV
KAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPKQIDALAKLLDVKREEVI
EMETRLSGRDIALESPTDDEDDKFSPIAYLSSEQSEPTKVLEAEQVTRLQSEGLETALSK
LDARSRRIIEARWLANDDGSGATLHALAEEFGVSAERIRQIEVAALKKMKGALAAWV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgcaacatccgcattggttccgaccaaaagtaatgcgctgggcctcgggttc
actggcaatctgggcaatattgacgcctatatctcggccgtgaaccgcctgcccatgttg
acccacgatgaagaaatttcgctggcgacacgcctgcgcgaaaaaaatgacctggccgcc
gcgcaagaactggtgctgtcgcacctgcgcctggtggtctcgattgcccgcggctacctg
ggctatggcttgccgcacgccgacctgattcaggaaggcaatatcggcttgatgaaagcc
gtgaaacgcttcgatccggaccagggcgtgcgcctggtatcgtacgccatgcactgggtg
aaagccgagatgcacgagtacatcctgaaaaactggcgcctggtcaaggtcgcgacgacg
aaggcacagcgcaagctgttcttcaacctgcgcagccacaagacgggcctcgatgcgatg
acgccgaagcagatcgatgcgctggccaagctgctcgacgtgaaacgcgaagaagtgatc
gaaatggaaacgcgcttgagcggccgcgacattgcactggaatcgccgaccgacgatgaa
gacgacaagttttcgccgatcgcctacctgtcgtcggagcaaagcgagccgaccaaggtg
ctggaagcggaacaagtgacgcgtctgcaatcggaaggcctggaaacggcactgtccaag
ctggatgcccgttcgcgccgcatcatcgaagcgcgctggctggccaacgacgacggttcc
ggcgccaccctgcacgctttggcagaagagttcggcgtatcggccgaacgcatccgccag
atcgaagtggcggcgctgaaaaaaatgaagggcgcgctggccgcctgggtgtaa
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