Janthinobacterium svalbardensis: CNX70_06025
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Entry
CNX70_06025 CDS
T05119
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv00240
Pyrimidine metabolism
jsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CNX70_06025
Enzymes [BR:
jsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
CNX70_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF4715
Motif
Other DBs
NCBI-ProteinID:
ATD63660
UniProt:
A0A290X3F9
LinkDB
All DBs
Position
complement(1358177..1359097)
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AA seq
306 aa
AA seq
DB search
MNNFLSFSQEVLAARAAGKAIVALESTIISHGMPYPQNVEMAREVEQIIRDGGAVPATIA
IIDGKICVGLSPEQLELLGTSPDAMKVSRRDLPFVLSQRKLGATTVAATMICAQLAGITV
FVTGGIGGVHRGAETSFDISADLQELAQTSVAVVCAGVKSILDIGLTLEYLETHGVPVIS
VGQEGFPAFFTRESGFKADFRLDTAAEQAAFIGTKWQLGLKGGVIVSNPVPAAQAMPKEE
IDAITKQALQEADAGGVKGKQVTPFLLSRIKQLTDGRSLATNIALVKHNAQVGTALAIAM
QAVVAR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgaataatttcctctcgttctcgcaagaagtgctagccgcgcgcgccgccggcaaggcc
atcgtggcgctggaatcgaccatcatttcgcacggcatgccgtatccgcaaaacgtggaa
atggcgcgcgaagtggaacagatcatccgtgacggcggcgccgtgccggccaccatcgcc
atcatcgacggcaagatctgcgtgggcctgtcgccggaacagcttgaattgctgggcacc
tcgcccgatgccatgaaagtcagccgccgcgacctgccgttcgtcctgtcgcagcgcaaa
ctgggcgccaccaccgtggccgccaccatgatctgcgcgcaactggccggcattaccgtg
ttcgtcacgggcggcatcggcggcgtgcaccgcggcgcggaaacgagcttcgacatttcc
gccgacttgcaggaactggcgcaaacctcggtcgccgtcgtctgcgcgggcgtcaaatcc
atcctcgacatcggcctgaccctggaatacctggaaacgcatggcgtgcccgtcatcagc
gtgggccaggaaggttttcccgccttcttcacgcgcgaaagcggcttcaaggccgatttc
cgcctcgatacggccgccgagcaggccgctttcatcggcacgaaatggcagctgggcttg
aaaggcggcgtcatcgtcagcaatccggtaccggccgcgcaagcgatgcccaaggaagaa
atcgacgcgatcaccaagcaagcgctgcaggaagcggacgcgggtggcgtgaaaggcaag
caagtcacgccattcctgttatcgcgcatcaagcagttgacggacggacgcagcctggcg
acgaatatcgcgctggtcaagcacaatgcccaggtcggcaccgcgctggccattgccatg
caggcggtcgtggcacgataa
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integrated database retrieval system
