Janthinobacterium svalbardensis: CNX70_12915
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Entry
CNX70_12915 CDS
T05119
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNX70_12915 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_12915 (recD)
Enzymes [BR:
jsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CNX70_12915 (recD)
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CNX70_12915 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
NAT10_TcmA_helicase
AAA_11
AAA_22
UvrD-helicase
DEAD
SLFN-g3_helicase
PhoH
AAA_25
nSTAND3
AAA_28
FtsK_SpoIIIE
Mg_chelatase
ResIII
AAA_24
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ATD60962
UniProt:
A0A290WVR1
LinkDB
All DBs
Position
2880010..2881968
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AA seq
652 aa
AA seq
DB search
MQHSEQMNALFSHVDGVAGDGHLRRLSAAFARFIASLDEQAPDAAAVAVACVVLSELEGR
GHSCLMLADLADEPSQLLGWSEELWHAVLAVSGPLPASLDGWRALLAGAPQVWQVGAPDV
RQPLVLDGDRLYLRRYWRDETLVGEKIAVRAQDLSTPPLVQVRQWLDILFDQPTQDGGPD
WQKVACAIALRGKVAIITGGPGTGKTYTVASLLTLLFAVSPQPEQLRIALAAPTGKAAAR
LKQSIDKALSGLAEKVGEALPLLELARRMGAARTLHSLLGARPDTRAFAHHAGNPLDVDV
LIVDEASMVHLEMMASVLDALPPTAILILLGDKDQLASVEAGAVLGDLCHDAQAGGYTEA
TIAYAQAASGVAIPPDFAGSAGALAQQTVMLRHSHRFSGPIGELALAVNGGRPDLVNACF
ASDSGGQLAWSVPAQQEEVLRLALRGRADAPGGYQPYLELVHAGEAAYGQHGDWVRAVLH
AFEAFRILCAVREGEWGVAGLNTAIELRLEKEGWIRRSEWYVGRPVMVTRNDYGTGVFNG
DIGLTLRDPARPGSLRVYFLEGENVRSVLATRLRHVETAFAMTVHKSQGSEFRHTVLVLP
QEGGAMLARELVYTGITRARDFFTLVSPTQAVLFDAILRRTQRASGLRGLIG
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatagtgagcaaatgaatgccttgttcagccacgtcgacggcgttgccggggat
ggccatctgcgccgcctgagcgccgcctttgcccgcttcatcgccagcctggacgagcag
gcgccggatgccgccgccgtggccgtggcctgcgtggtgctgtccgagctggaagggcgg
gggcacagctgtctgatgctggcggatctggccgacgagccgtcgcagctgctgggctgg
agcgaggagctgtggcatgccgtgctggccgtttccggcccgctgcccgcatcgcttgac
ggctggcgcgcgctgctggccggcgcgccgcaggtgtggcaggtgggtgcgcccgatgtg
cgccagccgctggtgctcgatggcgatcgtctgtacctgcgccgctactggcgcgacgag
accctggtcggtgaaaagatcgccgtgcgggcgcaggatttgagcacgccgccgctggta
caggtgcggcaatggctcgacatcctgttcgaccagcccacgcaggatggtggcccggac
tggcaaaaggtggcgtgcgccatcgccctgcgcggcaaggtggccatcatcacgggcggt
cccggcacgggcaagacgtacacggtggcgagcctgttgaccctgctgtttgccgtctcg
ccacaaccggagcagttgcgcatcgcgctggccgcgccgacgggcaaggcggccgcgcga
ttaaaacagtcgatcgacaaggctttgagcggcctggcggaaaaggttggggaagccttg
ccactgctggaactggcgcggcgcatgggcgcggcgcgcaccctgcacagtttgctgggc
gcgcggcccgatacgcgcgcctttgcccaccacgcgggcaatccgctcgacgtcgatgtg
ctgatcgtcgatgaagcgtcgatggtgcacctggagatgatggcctcggtgctcgacgcc
ttgccgcccacggcgatattgatactgctgggcgacaaggaccagctggcgtcggtggaa
gcgggcgccgtgctgggcgacttgtgccacgatgcgcaggcgggcggctacacggaggcc
accatcgcgtatgcgcaggcggccagcggcgtggccattccgcctgactttgcaggtagc
gccggcgcgctggcgcagcagacggtgatgctgcgccacagccaccgtttcagcggcccg
attggcgagctggcgttggccgtgaatggcggcaggcccgatctggtcaatgcgtgtttt
gccagcgatagcggcggccagctggcgtggagcgtgccggcgcagcaggaagaggtgctg
cgcctggccttgcgcggacgtgcggatgcaccgggcggttatcagccctatctggaactg
gtgcatgccggtgaagcagcgtatgggcagcatggcgactgggtgcgcgccgtgctgcac
gcttttgaagcattccgcatcctgtgcgccgtgcgcgaaggcgagtggggcgtggcgggc
ctgaacacggccatcgaactgcgactggaaaaggaaggctggatacgccgcagcgaatgg
tatgtggggcgccccgtgatggtcacgcgtaacgactacggcacgggcgtgttcaatggc
gacatcggcctgaccttgcgcgaccctgcgcggcccggctccctgcgcgtgtactttttg
gaaggcgagaacgtgcgcagcgtgctggccacgcgcttgcgtcacgtggaaacggcgttc
gccatgacggtgcacaagtcgcagggctcggaatttcgccacacggtgctggtgctgccg
caggagggcggcgccatgctggcgcgcgaactggtctacacgggcatcacgcgcgcgcgc
gacttctttaccctcgtctcgcccacgcaggccgtgctgttcgatgcgattctgcgccgc
acgcagcgcgccagcggcttgagggggctgatcggctga
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