Janthinobacterium svalbardensis: CNX70_16140
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Entry
CNX70_16140 CDS
T05119
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03030
DNA replication
jsv03430
Mismatch repair
jsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNX70_16140 (holB)
03430 Mismatch repair
CNX70_16140 (holB)
03440 Homologous recombination
CNX70_16140 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jsv03032
]
CNX70_16140 (holB)
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_16140 (holB)
Enzymes [BR:
jsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNX70_16140 (holB)
DNA replication proteins [BR:
jsv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNX70_16140 (holB)
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNX70_16140 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
YAcAr
Motif
Other DBs
NCBI-ProteinID:
ATD61520
UniProt:
A0A290WXB4
LinkDB
All DBs
Position
complement(3647202..3648230)
Genome browser
AA seq
342 aa
AA seq
DB search
MISSLYSWQQDAWQQLQALRPRMPHAILFHGAQGIGKADFIEHFAQALLCEDVRADGHAC
GACASCGWFSQGNHPDYRRVRPEALEDEVADDGEDGDGAKKSAKTKTPSKDIKIEQIRNL
ADFMNISTHRQGLRVVVLYPAEALNTPASNALLKTLEEPPPGTVFLLASNSLDRLLPTIL
SRCRKFALPMPSHEQALTWLKGQGLNDADSWLREQGGAPLAALAQSESGGREETEQLLQV
LANPGVEAALKAADKLQKAPLAPLVASLQRWLYDVFSVKLSGTIRYYPRHRRELEALAGR
INVSRLMAAIKAANDRRAIAEHPLSPKLFLEDMLLDYASSCQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatcagttctctctattcctggcagcaggacgcctggcagcaattgcaagccttgcgc
ccgcgcatgccgcacgccattttgttccatggcgcgcaaggcatcggcaaggccgacttc
atcgagcatttcgcgcaagccttgctgtgcgaagacgtgcgcgccgacggccacgcctgc
ggcgcctgcgcctcgtgcggctggtttagccagggcaaccatcctgattaccgcagggtt
cgtccggaagcgctggaagacgaagtggccgacgatggcgaagacggcgatggcgcgaag
aaaagcgccaagaccaagacgccgtcgaaagacatcaagatcgagcagatccgcaacctg
gccgacttcatgaacatttccacgcaccgccagggcttgcgcgtggtggtgctgtacccg
gccgaggcgctcaacacgcccgcctcgaacgccttgctgaaaaccctggaagaaccgccg
ccgggtaccgtgttcctgctggcatcgaacagcctggaccgcttgctgccgacgatcttg
tcgcgctgccgcaagtttgcactgcccatgcccagccacgagcaggccttgacctggctc
aagggccagggcttgaacgatgcggacagctggctgcgcgagcagggcggcgcgccgctg
gccgcgctggcccagtccgaatcggggggccgcgaagaaacggaacagttgctgcaagtg
ctggccaatcccggcgtggaagcggcgttgaaagcggcggataaattgcagaaggccccg
ctggcgccgctggtggcatccttgcagcgctggctgtacgacgtgttttccgtcaaattg
tcgggcaccatccgctactacccgcgccaccggcgcgagctggaagcgctggccggacgc
atcaacgtcagccgtttgatggccgccatcaaggccgccaacgatcgccgggcgatcgcc
gagcatcctttgtcgcccaagctgtttctggaagatatgctgctcgactacgcatcaagt
tgccaatag
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integrated database retrieval system
