Janthinobacterium svalbardense: CNX70_20440
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Entry
CNX70_20440 CDS
T05119
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jsv
Janthinobacterium svalbardense
Pathway
jsv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNX70_20440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_20440
Enzymes [BR:
jsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CNX70_20440
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNX70_20440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATD62245
UniProt:
A0A290WZA6
LinkDB
All DBs
Position
complement(4618674..4619531)
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AA seq
285 aa
AA seq
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MSRSAVFLDEMGVGPLWRLRQGAAPEALDVAAEAAVEMAVAVAELAAPAAVVEVFAEVEV
VEVEAFVAIAATPVPDDTAWFDDAPAPAPVKQLSDADIATLDWDGLTAAVAKCARCDLCK
TRKGVVMGRGDRQGAWLMLASSPSRAEEREGRALPGEQGKLLDNMLKAIDLEAGRDVYIT
HLLKCRPLDEAGQERLPTESESAACRPYFERELALLQPRTIVTLGSMTAAGINPGEKPVR
GKVRQLGSASVVATFHPEMLLQDETGKAKARAWADLCLAKSTHSG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcgccgttttcctcgatgaaatgggcgtcggcccattgtggcgcttgcgc
cagggcgccgcacccgaggcgcttgatgtcgccgccgaggctgccgtggagatggcggtg
gccgtggccgagcttgctgcgcctgctgccgtggtcgaagtgtttgccgaggtggaagtc
gtggaagtcgaggcatttgtcgccattgccgctacgcccgtccctgacgacacggcctgg
ttcgacgatgcgcccgcacccgcgccagtcaagcagctcagtgacgccgatatcgccacg
ctcgactgggatggcttgacggccgccgtcgccaaatgcgcgcgctgcgacttgtgcaag
acgcgcaagggcgtcgtcatgggccgtggcgaccgccagggcgcctggctgatgctggcc
agcagcccctcgcgtgcggaagagcgcgaagggcgcgccctgccgggcgagcagggcaaa
ttgctcgacaatatgctcaaagccatcgacctcgaagcgggccgcgacgtgtacatcacg
cacttgctgaaatgccgtccgctcgacgaggcggggcaggagcgcttgcccaccgaatca
gagtcggccgcctgccgcccgtatttcgagcgtgaactggccctgctgcaaccgcgcacc
atcgtcaccctcggttccatgaccgctgccggcatcaatcccggcgaaaaacccgtacgc
ggcaaggtgcgccagctgggcagcgcgtccgtcgtggctacttttcacccggaaatgttg
ctgcaggacgagacgggcaaggccaaggcgcgtgcctgggccgacctgtgcctggcgaaa
agcacgcacagtggttga
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