Janthinobacterium svalbardensis: CNX70_20920
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Entry
CNX70_20920 CDS
T05119
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNX70_20920 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jsv03019
]
CNX70_20920 (pnp)
03016 Transfer RNA biogenesis [BR:
jsv03016
]
CNX70_20920 (pnp)
Enzymes [BR:
jsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CNX70_20920 (pnp)
Messenger RNA biogenesis [BR:
jsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CNX70_20920 (pnp)
Transfer RNA biogenesis [BR:
jsv03016
]
Prokaryotic type
tRNA degradation factors
CNX70_20920 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
DUF5813
OB_RRP5_4th
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ATD62331
UniProt:
A0A290WZM6
LinkDB
All DBs
Position
complement(4722837..4724954)
Genome browser
AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFSGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAANGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggtcaacaccaagtgaccctggaaacc
ggcgaaatcgcacgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaaaccaggccaggatttcttccctttgacg
gtagattatgttgaaaaaacctatgctgccggtaaaatcccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcccgtctgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgttgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcctcggctgccctgtgcgta
tcgggcgtgcctttcagcggcccgatcggcgctgcgcgcgtcggttacgcgaatggccag
tacatcctgaacccgaccgtccagcaactgaaaacgtcggaaatggacctggtggtcgcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtctttggccacgaccagatgaaagtcgtcatcgacgcgattcat
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gctctgatcgctcgcgtcgcacatttcgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgtacggccaagctgaaagcagcgacgtcggaagtgatcgccgat
ctgtcggctgaagctgccgccaacggcggcgcgtcgatcgacagcgctgaagtgaacaac
atcctgttcgacatcgaagcgaaaatcgtgcgtacgcaaatcctcgacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgatccgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaagcgctggtcgtcgctacc
ctgggcaccgcccgcgacagccagaagatcgatgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccacgggcgaaacgggccgtgtcggtacg
cctaaacgccgcgaaatcggccacggccgtctggccaagcgcgcgctgatcgccgccctg
ccagcagctgaagagttcagctactcggtgcgcctggtatcggaaatcacggaatcgaac
ggttcttcgtcgatggcttcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaagaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
attcgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgacgctgctgccggccaggaagccaagcgccgcatcgaagaactg
accgcttccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaagacggcttgctgcacatcagccagatcgcc
aacgagcgcgtcaacgcggtcgccgattacctgaaagaaggccagctggtccgcgtcaaa
gtgctggaaacggatgaccgtggtcgtctgaagctgtcgatgaaagctgctgaaggcaac
gaagcgccagccgcttaa
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integrated database retrieval system
