KEGG   Janthinobacterium svalbardensis: CNX70_21210
Entry
CNX70_21210       CDS       T05119                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
jsv  Janthinobacterium svalbardensis
Pathway
jsv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:jsv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CNX70_21210 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:jsv02044]
    CNX70_21210 (icmF)
Secretion system [BR:jsv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CNX70_21210 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4381 DUF2852
Other DBs
NCBI-ProteinID: ATD62383
UniProt: A0A290WZU2
LinkDB
Position
complement(4779322..4783134)
AA seq 1270 aa
MLRRIWYFLTDSRNLTILGFVALAVFLYLGAEVLEVALIWALALLLLAFVTWLGLWLWRR
RRARRNAQALGQAILNEAEIAAAQAASASTANSTQQGELDAVRTGMLAAIETIKTSKLGL
KSGAAALYELPWYMIIGNPAAGKSSAILHSGLQFPFADGKVVQGVGGTRNCDWFFTTDGI
VLDTAGRYSVVDEHRGEWFGFLDLLKKYRRKAPINGILIAVSIAELKGDPDVGMQLARSL
RKRVQDVIERLEVFAPLYIVFTKADLIAGFTEFFADAERSERERVWGATMPYQRKLPTAD
LLAFFDQSFDELHDGLTELSLANMAHRQRKTMAPGVFTFPLEFAAVKPALRAFIATLFEE
NPFQFQPVFRGFYFTSALQEGEPVSASSQQVARRFDLAYAPAQVAAPSDVRQHGYFLLEL
FRKVIFADKHLVANYANRAKLRFKYAVFFAATVSLGACLGGWSWSYLGNRQLVANVEADL
NKVVKLQERRLDLQSRLEALEILQDRIEQLEAYRTQRPWSLRLGLYQGELLERKLREEYF
AGARQVMLDPVAGALEALLFEMNASADQLQPTARTPQTPAAAPAAASPATRSFQYQAASP
TNVEDAYNALKTYLMLADKTHAESSHLNDQLTRFWRGWLEGNRGAMPREQMIRSAERLLT
FYLAQIGDPSWPRIEQKLALVDQARENLRRVVRGMPARERVYADIRARASTRFPGMTVAR
IVGEQDQALLAGSYAVSGAFTRQAWEKFVEGAFRDAANRELQSADWVLKSASTDDLTLEG
SPEQIEKNLVAMYKADYAREWQKFVQGVAVADLKGFDGAVQAMNRLGDPQSSPIAKLLTT
IYEETSWDNPALQNAQLRKAERGIIAWFKETVLRRAPSQLTANPGVNAQIDPARLDKPMG
PVGREFAGVGKLVAARDNNASLMRAYLEALSKLRSRLNLLKNQGDAGPGARQFMQQTLEG
SGSELADALKLVDEQVLTGMSDAQKQAIRPILVRPLMQTFAVIVAPAELDINKTWAAQVY
EPFQKSLANKYPFAPTARIEASNLEIGQFFGPEGLVAKFVTTSMGPLVVRRGDVLAPRTW
ADMGISLSPQVVARFPGWIAPLGAGGVAATSTAAQTVFQIQPSPAPGTLEYTVEIDGQQL
RYRNTPAQWTNMLHPGPQGASGMQGARITAVTFDGRTVELFNEPGQFGLKRMIDAAAKKR
KDGGVFELRWTRGEVAVAVDLKITSSAETTGAGAATALQEQGFRGMQLPETIVGVPVPAP
VIAASAGVSP
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgctgcgacgaatctggtatttcctcactgacagccgcaatctgaccatcctcggcttc
gtggcgctggccgtgttcctgtacctgggggccgaggtgctggaagtggcgctgatctgg
gcgctggccttgctgctgctggcctttgtcacctggctgggcttgtggctgtggcgccgg
cgccgcgcgcggcgcaatgcccaggcgctggggcaagccatcctcaacgaggccgagatc
gccgccgcgcaagcggcctcggcctcgacggccaacagcacccagcagggtgaactcgac
gcggtgcgcacgggcatgctggctgccatcgagaccatcaagacgtccaagctgggcctc
aaatcgggcgccgccgccctgtacgaattgccgtggtacatgatcatcggcaatccggcc
gccggcaagagcagcgccattctgcattctggcctgcaattccctttcgccgacggcaag
gtggtgcaaggcgtgggcggcacgcgcaactgcgactggtttttcaccacggacggcatc
gtgctcgatacggcgggacgctactccgtcgttgacgagcaccgcggcgagtggttcggc
tttctcgacctgctgaaaaaataccggcgcaaggcgcccatcaacggcatcctcatcgcc
gtcagcatcgccgaattgaaaggcgaccccgacgtgggcatgcaactggcgcgcagcctg
cgcaagcgcgtgcaggacgtcatcgaacgcctggaagtgttcgcgcccctgtacatcgtg
tttaccaaggcagacctgatcgccggcttcacggaattttttgccgatgccgagcgcagc
gagcgcgagcgcgtttggggcgccaccatgccctatcagcgcaagctgcccacggccgac
ttgctggcgtttttcgaccagagtttcgatgaattgcacgatggcttgacggagctgagc
ctggccaacatggcacaccggcaacgcaagacgatggcgcccggcgtatttacttttccg
ctggaatttgccgccgtcaagccggccctgcgcgccttcatcgccaccctgttcgaggaa
aacccgttccagttccagcccgtgttccgcggcttttactttaccagcgcgctgcaggag
ggcgagcccgtgagtgcctcttcgcagcaggtggcgcgccgcttcgacctggcctacgcg
ccggcccaagtcgcagcgccgtccgatgtgcgccagcatggctatttcctgctggaactg
ttccgcaaggtgatttttgccgacaagcacctggtggccaactatgccaaccgcgccaag
ctgcgcttcaaatatgccgtgttctttgctgccaccgtgtcgctgggcgcctgcctgggc
ggctggagctggtcctacctgggcaaccggcaactggtggccaatgtcgaggccgatctg
aacaaagtggtgaagctgcaggagcgccggctggacttgcagtcgcgcctggaagcgctg
gagatcttgcaggaccgcatcgagcagctggaagcgtaccgcacgcaacgaccgtggtcc
ttgcgcctgggcctgtaccagggcgagttgcttgagcgcaagctgcgcgaagagtatttt
gccggcgcgcgccaggtcatgctggaccccgtggcgggcgcgctggaagccttgctgttc
gagatgaacgccagcgccgaccagttgcagcccacggcgcgcacgccgcagaccccggcc
gccgcgccagctgccgcatcgccagctacgcgctcgttccagtaccaggctgcgtcgccg
acaaatgtggaagatgcctacaacgcgctgaaaacctatctgatgctggccgataagacg
catgccgagagcagccatttgaatgatcagttgacgcgcttctggcgcggctggctggag
ggcaaccggggtgccatgccgcgcgagcagatgatacgcagcgccgaacggctgctgacg
ttttacctggcgcagatcggcgatccgtcctggccgcgcatcgagcagaagctggcgctg
gtcgaccaggcgcgcgaaaacctgcgccgcgtggtgcgcggcatgccggcgcgcgagcgc
gtgtatgccgacattcgcgcgcgcgcctcgacgcgttttcccggcatgacggtggcgcgc
atcgtcggcgaacaggatcaggcgctgctggcgggcagttacgccgtctccggcgccttt
acgcgccaggcttgggaaaagttcgtcgagggcgcctttcgcgacgccgccaaccgtgag
ctgcaaagcgccgactgggtgctgaaaagcgcgtccaccgacgacctgaccctggaaggc
agtccggaacagatcgagaaaaacctggtggccatgtacaaggccgactacgcgcgtgaa
tggcaaaaattcgtgcagggcgtcgccgtcgcggacctgaaaggctttgacggtgccgtg
caagcgatgaatcgcctgggcgacccgcagtcgtcgccgattgccaaactgctgacgacc
atttacgaggaaacctcgtgggacaacccggcgctgcagaatgcgcaattgcgcaaggcc
gagcggggcatcatcgcctggttcaaggaaaccgtgctgcgccgcgcgccatcgcagctg
acggccaatcctggcgtgaatgcgcagatcgacccggcccgcctggataaacccatgggg
cccgtggggcgcgaatttgccggcgtgggcaagctggtggcggccagagacaacaatgcc
tcgctgatgcgcgcctacctggaagcgctgtcgaaactgcgcagccgtttgaacttgctg
aagaaccagggcgacgcggggccgggtgcgcgccagttcatgcagcagaccctggaaggc
agtggttccgagctggccgacgccctgaagctggtcgacgagcaggtgctcacggggatg
agcgacgcgcaaaagcaggcgattcgccccattctcgtgcgcccgctgatgcagaccttt
gccgtcatcgtcgcgccggccgaactcgatatcaacaagacctgggcggcgcaggtatat
gaaccgttccagaaatcgctggcgaacaaatatccgttcgcgcccacggcgcgcatcgag
gcgagcaacctggagatcggccagttcttcggtccggaaggcctggtggcgaaattcgtc
accacctcgatggggccattggtggtgcggcgcggcgacgtgctggcaccgcgcacctgg
gccgacatgggcatcagcctgtcgccgcaggtggtggcgcgttttcccggctggatcgcg
ccgctgggcgcgggcggcgtggcggccacctcgacggcggcgcaaaccgtgttccagatc
cagccgtcgcccgcgcccggcaccctggaatacacggtggagatcgacggccagcagctg
cgctaccgtaacacgccggcgcagtggacgaacatgctccatcccggcccgcagggcgca
tcgggcatgcaaggggcgcgcatcacggccgtcaccttcgacgggcgcacggtggaactg
ttcaacgagccggggcaattcggcctgaagcgcatgatcgatgcggcggccaaaaagcgc
aaggacggcggcgtgttcgaactgcgctggacgcgcggcgaggtggccgtggcggtcgac
ctgaaaattaccagcagcgcggaaacgacgggcgctggtgccgccactgcgttgcaggag
cagggctttcgcggcatgcagctgcccgagaccatcgtcggcgttccagtacccgcgccg
gtcattgcagcgtcggcgggagtgtcgccatga

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