Janthinobacterium svalbardensis: CNX70_22500
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Entry
CNX70_22500 CDS
T05119
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jsv
Janthinobacterium svalbardensis
Pathway
jsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNX70_22500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jsv03019
]
CNX70_22500
03400 DNA repair and recombination proteins [BR:
jsv03400
]
CNX70_22500
Enzymes [BR:
jsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNX70_22500
Messenger RNA biogenesis [BR:
jsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CNX70_22500
DNA repair and recombination proteins [BR:
jsv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CNX70_22500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
MSSS
PcrA_UvrD_tudor
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATD64009
UniProt:
A0A290X4G5
LinkDB
All DBs
Position
complement(5053868..5055553)
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AA seq
561 aa
AA seq
DB search
MVNAISVVQDSGRARQRKIQRLLRSVFGIARLRTGQQEVIDSVLAGRDTLAIMPTGSGKS
LCYQLPAALLPGVTLVVSPLISLMKDQLEKLHALGITAVQLNSSLARAEEDAAIACIAQR
GRLIIFCTPERLTNTAFLSLLAGAPPSLVVIDEAHCISQWGHDFRPAYLDIAAALRALGR
PPVLALTATATGEVMADIDAQLEARKLHVINTGIYRANLRYRVIQVTNAAEKHDSVLRLL
RETAGVGIVYAATVKAVEDLAARLAELGESVTCYHGKLAARDRQHNQDLFMNGERRIMVA
TNAFGMGIDKPDTRFVIHLQVPANLEAYYQEAGRAGRDGLPADCTLLYFQEDKRVQQFFL
AKHYPTTEELAAIVAAAQDLPATFAFAALASSLPEFSDGHLKVCLKLLKDGKLLHQDRKL
GYSLKAPSAKSPSYAQLAQIYVDKQEREKQALEQMVAYAQSGLCRWKLLLDYFGDAGDFA
RCCTCDNCQSPPALAAPITLDELPPAPAHVSAPGSQIAVGSRVRVPRYQIGTVLSVAGDQ
VTIAFPENTTRTFMAEFVAPA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgctatttctgtagtgcaagattctggccgcgcccgccagcgcaagatccag
cggctgctgcgttcggtattcggcatcgcgcgcctgcgcactggccagcaggaagtcatc
gacagcgtgctggccgggcgcgacaccctggccatcatgcccaccggcagcggcaaatcg
ctgtgctaccagctgcccgccgccctgttgccgggcgtgacgctggtcgtctcgccgctc
atttcattgatgaaagaccagctggaaaagctgcacgcactgggcatcacggccgtgcag
ctcaatagcagcctggcgcgtgcggaagaggacgctgccatcgcctgcatcgcccagcgc
ggcaggctcatcatcttttgcacgccggagcgcctgaccaataccgcattcctgtcgctg
ctggctggcgcgccccccagcctggtggttatcgatgaagcccattgcatttcccagtgg
ggccacgacttccgtcccgcctacctggacatcgcggccgccctgcgcgcgctgggccgt
ccgcccgtgctggcgctgacggccacggccacaggagaagtgatggccgatatcgacgcg
caactggaagcgcgcaagctgcatgtcatcaatacgggcatctaccgcgccaatttgcgc
taccgcgtaatccaggttacgaatgccgcagagaaacacgatagcgtcttgcgcctgctg
cgcgagacggctggcgtgggcatcgtgtatgcggccaccgtcaaggccgtcgaggacctg
gcggcgcggctggcggaactgggcgagagcgtcacgtgctaccacggcaagctggcggcg
cgcgatcgccagcacaaccaggacttgttcatgaacggcgaacgccgcatcatggtcgcc
actaacgcgttcggcatgggcatcgacaagcccgacacccgcttcgtgattcacttgcag
gtgccggccaacctggaagcgtactaccaggaagcgggccgggcggggcgcgacggcttg
cccgccgactgcaccttgctgtacttccaggaagacaagcgggtccagcaattctttctg
gcgaagcattacccgacaactgaagaattggccgccatcgtggcggcagcgcaagacttg
ccggccacctttgctttcgctgcgctggcgtccagcctgcccgagttttccgacggccac
ttgaaggtgtgcctgaaactgttgaaagacggcaaactgctgcaccaggaccgcaagctg
ggctacagtctgaaagcgccctcggccaagtcgccctcgtatgcgcagctggcacagatc
tatgtcgacaagcaggagcgcgaaaaacaggcgctggagcagatggtggcgtatgcgcaa
agcggcctgtgccgctggaaactgctgctcgattactttggcgatgccggtgatttcgcg
cgctgctgcacttgcgataattgccagtcgccgcccgcgctggccgcgcccatcaccctg
gacgagttgccgcctgcgcctgctcatgtgtcggcgccagggtcccagatcgccgtcggc
agccgcgtgcgcgtgccccgttaccagatcggcaccgtgctatcggtggcgggcgaccag
gtcacgattgcgtttccggaaaacaccacgcgcaccttcatggccgagtttgtcgcaccg
gcttga
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