Janthinobacterium svalbardensis: CNX70_25405
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Entry
CNX70_25405 CDS
T05119
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
jsv
Janthinobacterium svalbardensis
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jsv03016
]
CNX70_25405
Enzymes [BR:
jsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CNX70_25405
Transfer RNA biogenesis [BR:
jsv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CNX70_25405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
ATD63116
UniProt:
A0A290X2L9
LinkDB
All DBs
Position
complement(5697225..5699294)
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AA seq
689 aa
AA seq
DB search
MNLFFEESGDFKVGTVLSQAGEAYQVEMASGKRTKVKVKDVLLQYEKPAPAELLEQAKSI
AAEIDLDFLWEVAGEDEFGFAELGAEYFGHAPLPPEAAGLILALHSAPVYFYKKGRGRYK
AAPEASLKAALAGIEKKKQQALVQASYVEELKQNRLPASMQPMVLQLLFKPDKNTIEYKA
LEAACTELHTTPPRLMLAVGGIASPKDLHLSKFLFENFPKGAGFPSVPVPAVTAKLPLAE
VAAFSIDDVTTTEIDDAFSVQPLPDGTVKVGIHIAAPGLGIRPEDVIDKMARQRMSTVYM
PGDKITMLPDEIVNAFTLAEGTTCPALSLYATLDPKADWAVISTQTRAELVPIASNLRHN
QLDDLVNEETLASGEGEYPHKADFAVLWQWAQQLEQGRMKKREAFGLKPEQNNRVDFNFY
VENDIVTVARRKRGAPLDKIVAELMIFANSTWGKMLHDHGVPGIYRSQGGGSGNSWAAKM
QVRMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQIIACAEHGVTAPLVAPFKPRDAN
LFAIVSAFDAAYAAYGDFQSNMERYWCLRWLHQENARQVDAVVLKDEILRLVDIPLVIKL
PGMPSVARGAQVKLDLLRWDEVDLSIEARLLEIAAVPDAAADAELDYEEDAGDAGAVEAA
PEAANQVSDADAEVAELASEDVVSEPEVK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaatctattttttgaagaatccggcgatttcaaggtcggcacggtcctgtcgcaagcg
ggtgaagcgtatcaagtggaaatggccagcggcaagcgcaccaaggtcaaggtcaaggat
gtgctgctgcagtatgaaaagccggccccggccgagctgctggaacaggccaagagcatt
gccgccgagatcgacctcgatttcctgtgggaagtggcgggcgaagacgagttcggcttt
gccgagctgggcgccgagtatttcggccacgcaccgttgccgccggaagcggccggcctg
atcctggccctgcattcggcgcccgtgtatttctacaagaagggccgtggccgctacaag
gcggcgccggaagcgtcgctgaaggcggccctggccggcatcgaaaagaaaaagcagcag
gcgctggtgcaggcaagctatgtggaagagctgaaacagaaccgcttgcctgcctcgatg
cagcccatggtgctgcaactgctgttcaaaccggacaagaacaccatcgaatacaaggcg
ctggaagcggcgtgcacagaattgcacacgacgccaccgcgcctgatgctggccgttggc
ggtattgcttcgccgaaagacttgcacctgtcgaaattcctctttgaaaatttcccgaaa
ggtgccggcttccccagcgtgcccgtgcccgccgtgacggccaagctgccgctggccgag
gtggccgccttctcgatcgacgacgtgaccaccaccgagatcgacgatgccttctccgtg
cagccgttgcccgatggcaccgtgaaagtgggtatccacatcgccgcgccgggcctgggc
atccgcccggaagacgtgatcgacaagatggcgcgccagcgcatgtcgaccgtctacatg
ccgggcgacaagatcaccatgctgccggacgaaatcgtgaatgctttcacgctggcggaa
ggcacgacgtgcccggccctgtcgctgtacgccaccctggacccgaaagccgactgggcg
gtcatcagcacgcagacgcgcgccgaactggtgccgatcgccagcaatttgcggcataac
cagttagacgacctggtcaacgaggaaaccctggccagcggcgaaggcgagtatccgcac
aaggccgattttgccgtgctgtggcaatgggcgcagcagctggaacagggccgcatgaag
aagcgcgaagcgttcggcctgaagccggaacagaataaccgcgtcgatttcaacttttat
gtggaaaacgatatcgtcaccgtggcgcgccgcaagcgtggcgcgccgctggacaagatc
gtcgccgaactgatgatctttgccaacagtacctggggcaagatgctgcacgaccatggc
gtgccgggcatctaccgcagccagggcggcggcagcggcaatagctgggcggccaagatg
caggtgcgcatggtgacccatgcggcgccgcaccagggcctgggtgtggatcaatatgcg
tggagcacctcgcccttgcgccgctacacggatctggtgaaccagtggcaaatcatcgcc
tgcgccgagcatggcgtgacggcgccgctggtggcgccattcaagccgcgcgatgcgaat
ttgttcgccatcgtttcggccttcgacgccgcgtatgccgcgtatggcgatttccagtcg
aacatggaacgctactggtgcttgcgctggctgcaccaggaaaacgcgcgccaggtcgat
gccgtcgtcttgaaagatgaaatcctgcgcctggtcgacattccgctcgtcatcaagctg
ccgggcatgccatcggtggcgcgcggcgcccaggtgaaactggacttgctgcgctgggat
gaagtcgacctgagcattgaagcgcgcctgttggaaatcgccgccgtgcccgatgcggcg
gccgatgccgagctcgactacgaagaagatgcgggtgacgccggcgcggtggaagcggcg
ccggaagcggcgaaccaggtcagcgatgccgatgcggaagtggcggaactggccagtgaa
gacgtggtcagcgagcccgaggtcaagtaa
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