Janthinobacterium svalbardensis: CNX70_27715
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Entry
CNX70_27715 CDS
T05119
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
jsv
Janthinobacterium svalbardensis
Brite
KEGG Orthology (KO) [BR:
jsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jsv03000
]
CNX70_27715
Transcription factors [BR:
jsv03000
]
Prokaryotic type
Helix-turn-helix
Other families
CNX70_27715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_2
HTH_30
PAS_4
HTH_23
HTH_7
Mg_chelatase
AAA
AAA_5
HTH_29
HTH_28
GAF_2
AAA_16
HTH_22
HTH_50
HTH_38
HTH_Tnp_ISL3
HTH_11
sCache_3_3
AAA_7
Cache_3-Cache_2
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
ATD64107
UniProt:
A0A290X4N8
LinkDB
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Position
6225246..6227171
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AA seq
641 aa
AA seq
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MPAGQDNVPVIIETSHQRSVAFGLSPTATPDFTPAGKSDLSLLIEQNRMLHTHAVPAMET
LYQQIVNTHNMVILTDANGVIVHSLGDDDFLEKANRVALQPGVAWSEQSRGTNAIGTAIT
EKVPTLVHADQHYLAANHFLTCSAAPITDHRGNVIGVLDVSSDQRSFHKHTMALVRMSAL
MIENQLFSATFEDAITVHFHARPEFIGTLMEGIASFTPGGRFLSANKNGLFQLGLSFAAL
QSHTFSSLFGLPVSALYEHYRTASPGLLNLCMHSGVRVYGRAQLRLSNSVFQHGFTASTD
HSDINAVPAQVPAPASHAANAARRLSGLRYLRTGDPQLELVIEKVNKVLGRDIPILVMGE
TGTGKELLAQAIHNDSPRAMGPFIAVNCASIPETLIESELFGYEDGAFTGARKKGAIGKI
LQANGGTLFLDEIGDMPFGLQARLLRVLQERMVTPLGSSKSITVNVELICATNHNLRERM
AKGLFREDLYYRLNGLVVKLPPLRERTDLDTVVKKILATEAPDTRYTVAPDILRLFHQHK
WPGNFRQLTNLLRTAIVMAGDEHEICLRHMPDDFLDDIEMTQATAASASTDRMIAAGANL
EEMEQSAILKSLDAHGGNVSATARALGVSRNTIYRKVPHLK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
ttgccggcaggacaagacaacgtccccgtcatcatcgaaacgtcccatcagcgttcagtc
gcctttggcctgtcgcccacggccacgcccgactttacgccggccggcaaatccgatctg
tccttgctgatcgagcaaaaccgcatgctgcacacgcacgcagtgcccgccatggaaacg
ctgtaccagcaaatcgtcaatacgcacaatatggtgatcttgacggatgccaacggcgtc
atcgtgcattcgctgggcgacgatgatttcctggagaaagccaaccgcgtggccctgcag
ccgggcgtggcatggtcggaacaaagccgcggcacgaatgccatcggcacggccatcacg
gaaaaagtaccgacgttggtccatgcggaccagcattacctggccgccaatcatttcctg
acgtgctccgcggcaccgatcaccgaccaccgcggtaatgtcatcggcgtgctggacgtg
tccagcgaccagcgcagctttcacaagcatacgatggccttggtgcgcatgtcggcgctg
atgattgagaatcagctgttttccgccaccttcgaagacgccatcaccgtgcacttccac
gcgcggcccgaattcatcggcaccttgatggaaggcatcgcctcattcacgccgggcgga
cggtttttatccgccaataaaaacggtttgttccagctgggcctgtcattcgccgcgctg
caatcccataccttcagctccctgttcggcttgcccgtgtctgccctgtacgaacattac
cgcacggcctcacccggcttgctgaacctgtgcatgcacagcggcgtgcgcgtgtatggg
cgcgcgcagttgcgcttgtccaatagcgtcttccagcacggctttactgccagcaccgac
catagcgatatcaacgccgtgccggcccaggttcccgcgccagccagccatgcggccaac
gcggcgcgccgcctgtcgggcctgcgttatctgcgcacgggcgatccgcaactggaactg
gtgatagaaaaggtcaacaaggtattgggacgcgatattcccatcctcgtcatgggcgaa
acgggcaccggcaaggaattgctggcgcaagccatccataacgactcgccgcgcgccatg
ggaccgtttatcgccgtcaattgcgcgtcgatcccggaaaccctgatcgagtctgaactg
ttcggctatgaagacggggcatttacgggcgcgcgcaagaagggggccatcggcaagatc
ctgcaagccaatggtggcaccctgttcctcgatgaaatcggcgacatgccctttggcttg
caggcgcggctgttgcgcgtgctgcaggaacgcatggtcaccccgctgggcagcagcaaa
tcaatcaccgtcaatgtggaactcatttgcgccacgaatcacaacttgcgcgaacgcatg
gccaagggactgtttcgcgaagacttgtattaccgcctgaatggcctggtggtcaaactg
ccgccgctgcgcgagcgcaccgacctggacacggtcgtgaaaaaaatcctcgcaacggaa
gcacccgatacgcgctacacggtggcgccggacatcctgcgcttgttccaccagcataaa
tggccaggcaacttccgccagttgaccaatctcttgcgcacggccatcgtcatggcaggc
gacgagcatgaaatctgtttgcgccacatgcctgatgatttcctcgacgatatagagatg
acgcaagcgactgccgccagcgccagcacggaccgcatgatcgccgccggcgccaacctg
gaagaaatggaacaaagcgcgatcctcaagtcgctcgatgcgcatggcggcaacgtctcg
gccacggcgcgggccctgggcgtgtcgcgcaacacgatctatcgcaaggtgccgcatctg
aaatag
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