Janibacter indicus: ASJ30_05915
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Entry
ASJ30_05915 CDS
T04569
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jte
Janibacter indicus
Pathway
jte03030
DNA replication
jte03430
Mismatch repair
jte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASJ30_05915
03430 Mismatch repair
ASJ30_05915
03440 Homologous recombination
ASJ30_05915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jte03032
]
ASJ30_05915
03400 DNA repair and recombination proteins [BR:
jte03400
]
ASJ30_05915
Enzymes [BR:
jte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASJ30_05915
DNA replication proteins [BR:
jte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASJ30_05915
DNA repair and recombination proteins [BR:
jte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASJ30_05915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
APH01132
UniProt:
A0A1L3MFM3
LinkDB
All DBs
Position
1240823..1244425
Genome browser
AA seq
1200 aa
AA seq
DB search
MSELPRSENFVHLHNHTEYSMLDGAARIKDMFATAQEMGMPAIAMTDHGYLFGAHEFWKT
AQSYDVKPIIGLEAYVAPGTHRTDKVKVKWGDERTPRGDDVSGGGAYTHMTLLARNNTGM
HNLFTMGSRASLDSVFAKWPRLDRELLSQYGEGLVATTGCPSGEIQTRLRLGQYDKAVEA
ASEFRDIFGREHYFLELMDHGNQIERRVREDLMRLAKDLQLPLLATNDLHYVKQEDAIAQ
DALLCINSGSKLHDPDRFKFDGEGYYLKSPAEMRQLWRELPEACDNTLLVADMCEVSFTE
GEGRYMPRFDCPPGEDETSWFIKEVQTGLHRRFPDGIPEYAQRQADYEIDVIVGKGYPGY
FLVVADFINWAKDNGIRVGPGRGSGAGSMCAYAMGITDLDPIPHGLIFERFLNPERKSMP
DFDVDFDERRRSEVIRYVSDKYGDERVAMIATYGTIKAKQAVKDAARVMGHPFNVGEQLT
KAMPADVMGKGVPLAKMWDKDHDRFGEGQEFRQLVESEKHLGEVVDLARGLEGLKRQWGV
HAAGVIMSSEPLIDVIPIMRRLQDGQVLTQFDYPTCETLGLVKMDFLGLRNLTILDDALV
NIRQNRDEEIDLDALSKDMTDKATYRLLSRGDTLGVFQLDGGGMRTLLRLMQPDNFEDIS
AALALYRPGPMGVNAHTNFALRKNGRQEVVPLDPQLKGKLQPQMEEALGPILGTTYGLCI
YQEQVMEIAQKLAGYTLGNADLLRRAMGKKKKEVLDAEYIPFSEGMKANGYNEESIAALW
GVLVPFSDYAFNKAHTAAYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKSALYLNECR
RMGIKVLPPSVNDSQGPFSAVGSDIRFGLNAIRNVGRNVVDGIISAREEKGAFTSFDDFL
AKCPAVVCNKRTIESLIMGGAFDDLEHPRQGLVMVHEEYVDAFVGVKRQEAVGQDSLWDM
FGGGDDDADAPGAGIEGMGLRPVPDIEWDKRTKLANEREMLGLYVSDHPLFGVEHVLQRA
ADTSIATLTQADSGVKENSNVTIAGLVTGLSVKRTKKGDLWAIATIEDLEGAIECLFFPK
TYLTVQTMLTQDIVAVVRGRVNARDDSVSIYAEDLTIPELTDGPRGPVVLTLDYARATTG
RIEEVKQVLSQHPGSTDVQIKLVQPGRAVTMSVDAAYRVEPTEALIGDLKVILGARAVSA
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagctgccgcgttccgagaacttcgtccacctgcacaaccacaccgagtactcg
atgctcgatggtgccgcgcggatcaaggacatgttcgccacggcccaggagatgggcatg
ccggcgatcgcgatgaccgaccacggctacctcttcggcgcccacgagttctggaagacg
gcgcagtcctacgacgtcaagccgatcatcgggctcgaggcctacgtggcgcccggcacg
caccgcaccgacaaggtcaaggtcaagtggggcgacgagcggaccccgcgcggcgacgac
gtctccggtggtggcgcctacacccacatgacgctgctcgcccgcaacaacactggcatg
cacaacctcttcaccatgggcagccgggcctcgctcgactcggtcttcgccaagtggccg
cgcctggaccgcgagctgctctcgcagtacggcgagggcctggtcgccacgaccggctgc
ccgtccggcgagatccagacccgcctgcggctggggcagtacgacaaggcggtcgaggcg
gcctcggagttccgcgacatcttcggccgcgagcactacttcctcgagctcatggaccac
ggcaaccagatcgagcgtcgggtgcgcgaagacctcatgcgcctggccaaggacctgcag
ctgccgctcctggcgaccaacgacctgcactacgtcaagcaggaggacgcgatcgcgcag
gacgccctgctgtgcatcaactccggctccaagctccacgaccccgaccgcttcaagttc
gacggtgagggctactacctcaagtcgcccgccgagatgcgtcagctgtggcgcgagctg
cccgaggcctgcgacaacaccctgctcgtcgccgacatgtgcgaggtctccttcaccgag
ggcgaagggcggtacatgccgcgcttcgactgcccgccgggcgaggacgagacctcgtgg
ttcatcaaggaggtccagaccgggctgcaccgtcgcttccccgacggcatccccgagtac
gcgcagcgccaggccgactacgagatcgacgtcatcgtcggcaagggctacccgggctac
ttcctcgtcgtcgccgacttcatcaactgggccaaggacaacggcatccgcgtggggccg
gggcgtggctccggtgccgggtcgatgtgcgcctacgcgatgggcatcaccgacctcgac
cccatcccgcacggcctgatcttcgagcgcttcctcaaccccgagcgcaagtcgatgccg
gacttcgacgtcgacttcgacgagcgtcggcgctccgaggtcatccgctacgtctccgac
aagtacggcgacgagcgggtggcgatgatcgccacctacggcacgatcaaggccaagcag
gcggtcaaggacgccgcccgcgtcatgggccaccccttcaacgtcggcgagcagctgacc
aaggccatgcccgccgacgtcatgggcaagggcgtgccgctggcgaagatgtgggacaag
gaccacgaccgcttcggtgaggggcaggagttccgccagctcgtcgagtcggagaagcac
ctgggtgaggtcgtcgacctggcccgcggtctcgaggggctgaagcgccagtggggcgtg
cacgccgccggcgtcatcatgagcagcgagccgctcatcgacgtcatcccgatcatgcgc
cggctccaggacggtcaggtcctcacgcagttcgactacccgacgtgcgagacgctcggc
ctggtcaagatggacttcctcggcctgcgcaacctgacgatcctcgacgacgccctggtc
aacatccggcagaaccgcgacgaggagatcgacctcgacgccctgtccaaggacatgacc
gacaaggcgacctaccgcctgctctcgcgtggcgacacgctcggcgtcttccagctcgac
ggtggcggcatgcgcaccctgctgcggttgatgcagccggacaacttcgaggacatctcc
gccgccctcgcgctctaccgacccggcccgatgggtgtcaacgcccacaccaacttcgcc
ctgcgcaagaacggccgccaggaggtcgtgccgctcgacccgcagctcaagggcaagctc
cagccgcagatggaggaggccctcggcccgatcctcgggacgacctacggcctgtgcatc
taccaggagcaggtcatggagatcgcgcagaagctcgccgggtacaccctcggcaacgcc
gacctgctgcgccgcgccatgggcaagaagaagaaggaggtgctcgacgccgagtacatc
cccttctccgagggcatgaaggccaatggctacaacgaggagtcgatcgccgcgctctgg
ggcgtgctcgtccccttctccgactacgccttcaacaaggcgcacaccgccgcctacggc
ctcgtctcctactggaccgcctatctcaaggccaactacccggctgagtacatggccgcg
ctgctcacctcggtcggcgacgacaaggacaagtcggcgctctacctcaacgagtgccgc
cgcatgggcatcaaggtgctgccgccctcggtcaacgactcgcagggccccttctccgcc
gtcgggtccgacatccgcttcggcctcaacgccatccgcaacgtcggccgcaatgtcgtc
gacggcatcatctccgcgcgtgaggaaaagggagccttcacctccttcgacgacttcctc
gccaagtgccccgccgtcgtgtgcaacaagcgcaccatcgagtcgctcatcatgggcggt
gccttcgacgacctcgagcacccgcgccagggactggtcatggtgcacgaggagtatgtc
gacgccttcgtcggggtcaagcgccaggaggccgtggggcaggactcgctgtgggacatg
ttcggcggtggcgacgacgacgccgacgcgcccggcgcgggcatcgagggcatgggtctg
cgcccggtccccgacatcgagtgggacaagcgcaccaagctcgccaacgagcgcgagatg
cttggtctctacgtctcggaccacccgctcttcggcgtcgagcacgtgctgcagcgcgcc
gccgacacctcgatcgcgacgctcacccaggccgactcgggggtcaaggagaacagcaat
gtcaccatcgccggcctggtcaccgggctgagcgtcaagcgcaccaagaagggcgacctc
tgggcgatcgccacgatcgaggacctcgagggcgccatcgagtgcctcttcttccccaag
acctatctcacggtccagacgatgctcacccaggacatcgtcgccgtggtgcgcggtcgg
gtgaacgcccgcgacgactcggtctcgatctacgccgaggacctgacgatccccgagctc
accgacgggccacgtggccccgtcgtgctcaccctcgactacgcccgcgccacgaccggg
cggatcgaggaggtcaagcaggtcctctcgcagcaccccggcagcaccgacgtgcagatc
aagctggtccagcccggtcgggcggtgacgatgtcggtcgacgcggcctaccgggtcgaa
ccgaccgaggcgctcatcggcgacctcaaggtgatcctcggggcgcgggcggtgtcggca
tga
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