Janibacter indicus: ASJ30_06605
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Entry
ASJ30_06605 CDS
T04569
Name
(GenBank) endonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jte
Janibacter indicus
Pathway
jte03030
DNA replication
jte03430
Mismatch repair
jte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASJ30_06605
03430 Mismatch repair
ASJ30_06605
03440 Homologous recombination
ASJ30_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jte03032
]
ASJ30_06605
03400 DNA repair and recombination proteins [BR:
jte03400
]
ASJ30_06605
Enzymes [BR:
jte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASJ30_06605
DNA replication proteins [BR:
jte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASJ30_06605
DNA repair and recombination proteins [BR:
jte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASJ30_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
UVR
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
APH01256
UniProt:
A0A1L3MGB1
LinkDB
All DBs
Position
complement(1391263..1392954)
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AA seq
563 aa
AA seq
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MEIVQDRLDDLGTPLAEVTFVVVDLETTGGSARDCGITEIGAVKVRGGEELGELQTFVNP
GEPIPAFIQSLTGITDAMVADAPRAGEAVASFLEFARGAVLVAHNAGFDIGFLKAACAAH
DLRWPGHTVLDTVRLARQVVSRDEVANHKLGTLARHFGASTTPDHRALHDARATVDVLHG
LIGRLGSVGVHTLEELSSYTSRVSDELRRKRHLADGLPSAPGVYVFKDERGEPLYVGTSV
DIRARARSYFTASEQRRRMGEMVRLATEITPIVCATTLEAQVRELRLIAAHKPRYNRRSR
HPERAWWLKLTDETFPRLSIVRSVGPDDLAYAGPFGTRGSAEEAMAALHDAVPLRQCLAR
LSPRRPTSACALADMGRCSAPCTGEVPVEDYAVTVAEAAAVLVGDSRAAVAALRERMAAL
SSQERFEEAGALRDRLADLVRAASRSQRATPLASTAELVAARRTARGGWDLVCVRHGRLA
GSSHSPVGADPMPYVAALRASAEVVAPPTGPGTSALPEETELVLRWLEAEGTRLVDIDGE
WTCPVGGAAAAHRELAPALGWAS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtgcaggaccggttggatgatctcggcaccccgctggccgaggtcaccttc
gtcgtcgtcgacctcgagacgacgggcgggtcggcccgcgactgcggcatcaccgagatc
ggtgcggtcaaggtgcgcggcggcgaggagctcggcgagctgcagaccttcgtcaacccc
ggcgagcccatcccggccttcatccagtcgctcaccggcatcaccgacgcgatggtcgcc
gacgcaccccgggccggtgaggcggttgcgagcttcctcgagttcgcccgcggtgcggtg
ctcgtcgcgcacaacgccggcttcgacatcggcttcctcaaggcggcctgcgccgcccac
gacctgcgctggcccggccacaccgtcctcgacaccgtgcggctggcgcggcaggtcgtc
tcccgcgacgaggtggccaaccacaagctgggcaccctcgcccgtcacttcggcgcgagc
acgacacccgaccaccgtgccctgcacgacgcccgcgcgaccgtcgacgtgctccacggc
ctcatcgggcgcctcggctcggtcggggtgcacacgctcgaggagctgagctcctacacc
tcccgggtcagcgacgagctgcgtcgcaagcgccacctcgccgatgggctcccgtcggca
cccggcgtctacgtcttcaaggacgagcgcggcgagccgctctacgtcggcacctccgtc
gacatccgcgcgcgagcccgcagctacttcaccgcctccgagcagcgtcggcgcatgggc
gagatggtgcgcctggccaccgagatcacccccatcgtgtgcgcgacgacgctcgaggcc
caggtgcgcgagctgcgcctcatcgccgcccacaagccgcgctacaaccgccgctcgcgc
caccccgagcgggcctggtggctcaagctcaccgacgagaccttcccccggctgtcgata
gtgcgctcggtcggacccgacgacctcgcctatgccggcccgttcggcacccgcggctcg
gccgaggaggccatggccgcgctccacgacgccgtccccctgcgccagtgcctggcccgg
ctctccccgcggcgtccgacgtcggcctgcgccctcgccgacatgggccggtgctcggcg
ccgtgcaccggcgaggtgcccgtcgaggactacgcggtgaccgtcgccgaggccgccgcc
gtgctcgtcggcgactcccgggccgcggtcgccgcgctgcgcgagcggatggccgcgctc
tcctcccaggagcgcttcgaggaggccggggccctgcgtgatcgcctggccgacctcgtg
cgcgcggcctcccgcagccagcgggccaccccgctcgcctcgaccgccgagctggtggcc
gcgcggcggaccgcccgcggcgggtgggacctcgtgtgcgtgcgccacggccgcctcgcc
ggcagctcccactcccccgtcggcgccgacccgatgccctacgtcgccgcgctgcgggcc
agcgccgaggtcgtcgccccgccgaccggcccgggcaccagcgcgctgcccgaggagacc
gagctcgtcctgcgctggctcgaggccgagggcacccggctggtcgacatcgacggcgag
tggacctgcccggtcgggggtgccgccgcggcccatcgcgagctggcccctgctctaggg
tgggcctcgtga
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