Janibacter indicus: ASJ30_06950
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Entry
ASJ30_06950 CDS
T04569
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
jte
Janibacter indicus
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jte03016
]
ASJ30_06950
Enzymes [BR:
jte01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ASJ30_06950
Transfer RNA biogenesis [BR:
jte03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ASJ30_06950
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
APH01318
UniProt:
A0A1L3MGB7
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Position
complement(1473843..1475075)
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AA seq
410 aa
AA seq
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MSDEPVTDEAAEAPAPLPVLTEPAEGVPPVITSESELDDCAAAIAAGVGPVALDAERASG
YRYGQSAYLVQVRREGAGTWLIDPVTLPDLTPLDRSIGTGEWILHAATQDLPCLREVGLV
PRQIFDTELAARLLGLPRVGLAAVIEHYLGISLAKEHSAVDWSTRPLPEPWLRYAALDVE
VLGELRNLMGADLAAQGKSEWARQEFEALLSWRPAVKEDPWRRTSGLHKIRQPRVLATVR
ELWYERDRIARDRDTSPGRVIPDTSLVDIALADPHEPTDLPRGHRAIQRNQRAWLDAVAR
ARKLPDAELPPASVKADGPPPQRSWANRDPLAAERLAATREALGAFAEERTVPIENVCSP
DPLRRVVWSPPAERTPAAFAAALADLGVRPWQREIVAPMLADAFAAHPDA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagcccgtcacggacgaggcagcggaggcgcccgctccgctgccggtgctc
accgagcccgccgagggcgtcccgccggtcatcacgagcgagtccgagctcgacgactgc
gcggcggcgatcgccgcgggcgtcggaccggtggcgctcgacgccgagcgtgcgtccgga
tatcgctacgggcagagcgcctacctcgtccaggtacgtcgcgagggcgccgggacctgg
ctcatcgacccggtgaccctgcccgacctgacacctctcgatcggtccatcggcaccggt
gagtggatcctgcacgcggccacccaggacctgccctgcctgcgcgaggtaggtctggtg
ccacggcagatcttcgacaccgagctcgccgcgcgcctgctcgggctcccgcgcgtcggg
ctcgccgccgtcatcgagcactacctcggcatcagcctggccaaggagcactccgcggtc
gactggtcgacccgaccgctgcccgagccgtggctgcgctacgcggcgctcgacgtcgag
gtgctcggcgagctgcgcaacctcatgggcgcggacctggccgcccagggcaaaagcgag
tgggcgcgacaggagttcgaggccctgctgtcctggcgcccggccgtcaaggaggacccg
tggcgacgcacctccggcctccacaagatccgtcagccgcgcgtcctcgcgacggtgcgc
gagctctggtacgagcgcgaccgcatcgcgcgcgaccgcgacacctcgccgggtcgggtc
atccccgacacctccctcgtcgacatcgccctcgccgacccccacgagcccaccgacctg
cctcgcggccaccgggcaatccagcgcaaccagcgcgcctggctcgacgccgtggcccgg
gcccgcaagctccccgacgccgagctgcccccggcctcggtcaaggccgacgggcctcca
ccgcagcgctcctgggccaaccgcgacccgctggccgcggagcggctggccgccacccgc
gaggccctcggcgccttcgccgaggagcgcacggtcccgatcgaaaacgtctgctccccc
gacccgctgcgccgggtcgtgtggagcccgccggcggagcgcacccccgcagccttcgcc
gccgccctcgccgacctcggcgtgcgcccctggcagcgcgagatcgtcgccccgatgctc
gccgacgccttcgccgcccaccctgacgcctga
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