Janibacter indicus: ASJ30_12950
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Entry
ASJ30_12950 CDS
T04569
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jte
Janibacter indicus
Brite
KEGG Orthology (KO) [BR:
jte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jte03032
]
ASJ30_12950
03400 DNA repair and recombination proteins [BR:
jte03400
]
ASJ30_12950
Enzymes [BR:
jte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ASJ30_12950
DNA replication proteins [BR:
jte03032
]
Prokaryotic type
DNA Topoisomerases
ASJ30_12950
DNA repair and recombination proteins [BR:
jte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASJ30_12950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
APH02323
UniProt:
A0A1L3MIX1
LinkDB
All DBs
Position
complement(2691636..2694413)
Genome browser
AA seq
925 aa
AA seq
DB search
MASKLVIVESPAKAKTIAGYLGPDYAVEASVGHIRDIPTPSEMPADMKKGPFGRFGINIE
EGFEPFYVVDPDKKKKVTELKRLLKDADTLYLATDEDREGEAIAWHLLETLKPKVPVKRM
VFHEITKEAIQRAVEDTRELDLDLVNAQESRRILDRLYGYEVSPVLWRKVKAGLSAGRVQ
SVATRIVVERERERMAFKVASYWSVEGKFSTGAAPFAARLASLDGRKVATGSDFDDTGAV
KKDARALDERAATQVAEATIAAAVTVSSVSEKPYTRRPYAPFTTSTLQQEAGRKLGLGSK
AAMGVAQKLYENGYITYMRTDSTNLSSSALDAARGQARDMYGADFVPESPRVYGKKSKNA
QEAHEAIRPAGDRFRTPAQVAGELRGDEFRLYELIWKRTVASQMADAKGSTATIRMRADL
AGCEAGELAEYTASGTVITFRGFLAAYEEGTDEPAQPDKDGEARLPKVEEGASLDVVDAT
ASGHETSPPARYTEASLVKKMEELGIGRPSTYASTISTIQDRGYVRKKGTALVPTWLAFA
VTRLMEVHFSRLVDYDFTASMEVDLDEIAAGDADRVAWLQRFYYGDEGSGPGLSGLVSDL
GDIDARAISTIEIGDGIVVRVGRYGPYVEEVVPKGVDPATGEVTDETKTTPAPKRATITD
DVAPDELTPAMAREFLAAAADDGRVLGQDPETGRDVVVKNGRYGPYVTEVLEESADDKPK
RGKAKVKPRTASLFKSMDPSTVDLEQALKLLSLPRTIGTVTETTTGEDGAETSVEVPITA
QNGRYGPYLKKGTDSRSIETEEQLFTMTLEEAVAIYAQPKQRGRAAAKPPLAEFGEDPVS
GKKVVVKDGRFGPYVTDGETNATLRRGDEPETLTAERAYELIAEKRAKGPTTRKKSAKKT
AKKTAKKATKSTAKKATKKAAAKKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaagctcgtcatcgtcgagtcacccgccaaggccaagaccatcgcggggtac
ctcggtccggactacgccgtcgaggcgtcggtggggcacatccgggacatcccgaccccg
tccgagatgccggcggacatgaagaagggtcccttcggtcgcttcgggatcaacatcgaa
gagggcttcgagcccttctacgtcgtcgacccggacaagaagaagaaggtcaccgagctc
aagcgtctgctcaaggacgccgacaccctctacctcgccaccgatgaggaccgcgagggc
gaggccatcgcgtggcacctgctcgagacgctcaagcccaaggtccccgtcaagcggatg
gtcttccacgagatcaccaaggaggccatccagcgggccgtcgaggacacccgcgagctc
gacctcgacctcgtcaacgcgcaggagtcgcgccgcatcctcgaccgtctctacggctac
gaggtctcgccggtcctgtggcgcaaggtcaaggcggggctgtccgccggtcgtgtgcag
tcggtcgccacccgcatcgtcgtcgagcgcgagcgcgagcggatggccttcaaggtcgcc
tcctactggagtgtcgagggcaagttcagcaccggtgcggcccccttcgccgcgcgcctg
gccagcctcgacggacgcaaggtcgccaccggctccgacttcgacgacaccggcgcggtc
aagaaggacgcccgcgcgctcgacgagcgtgccgccacccaggtcgccgaggcgacgatc
gcggcggcggtgaccgtcagctcggtctccgagaagccctacacgcgccggccgtacgcc
cccttcaccacgtcgacgctgcagcaggaggccggccgcaagctcggcctcggctccaag
gcggcgatgggcgtggcgcagaagctgtacgagaacggctacatcacctacatgcgtacc
gacagcaccaacctgtcgagctcggcgctcgacgccgcccgcggccaggcccgcgacatg
tacggcgccgacttcgtgcccgagtcgccgcgcgtctacggcaagaagtccaagaacgcg
caggaggcgcacgaggcgatccgccccgccggcgaccgcttccgcaccccggcgcaggtg
gccggtgagctgcggggcgacgagttccggctctacgagctgatctggaagcgcacggtc
gcctcgcagatggccgacgccaagggctcgaccgcgacgatccgcatgcgcgccgacctc
gccggctgcgaggccggcgagctcgccgagtacaccgcctccggcacggtcatcaccttc
cgcggcttcctcgccgcctacgaggagggcaccgacgagccggcgcagccggacaaggac
ggcgaggcacgcctgcccaaggtcgaggagggcgcgagcctcgacgttgtcgacgcgacc
gcgtcgggtcacgagacctcaccgccggcgcgctacaccgaggcctcgctggtcaagaag
atggaggagctcggcatcggccgcccctccacctatgcctcgacgatcagcacgatccag
gaccgcggctacgtccgcaagaagggcaccgcgctcgtcccgacgtggttggctttcgcg
gtgacccgcctgatggaggtgcacttcagccggctcgtcgactacgacttcaccgcgtcg
atggaggtcgacctcgacgagatcgccgccggcgacgccgaccgcgtcgcctggctgcag
cgcttctactacggcgacgagggcagcggccccggcctgtccgggctggtctccgacctc
ggcgacatcgacgcccgggcgatctcgacgatcgagatcggcgacggcatcgtcgtgcgg
gtcggtcgctacggcccctacgtcgaggaggtcgtgccgaagggggtcgacccggccacc
ggtgaggtcaccgacgagacgaagacgacgccggcgcccaagcgggcgacgatcaccgac
gacgtcgcgcccgacgagctcacgccggcgatggcgcgcgagttcctcgccgcggccgcc
gacgacggtcgggtcctgggccaggaccccgagaccggccgcgacgtcgtcgtcaagaac
ggtcgttacggcccctacgtcaccgaggtgctcgaggagtcggccgacgacaagcccaag
cgtggcaaggccaaggtcaagccgcgcacggcctcgctcttcaagagcatggacccctcg
acggtcgacctcgagcaggcgctgaagctcctctcgctgccgcgcacgatcggcacggtc
accgagaccacgaccggtgaggacggcgcggagacgtccgtcgaggtgccgatcaccgcg
cagaacggtcgctacgggccgtacctgaagaagggcaccgactcgcgctccatcgagacc
gaggagcagctcttcacgatgaccctcgaggaggccgtcgcgatctacgcccagcccaag
cagcgtggccgcgccgcggccaagccgccgctggcggagttcggcgaggacccggtgagc
ggcaagaaggtcgtcgtcaaggacgggcgcttcggcccctacgtcaccgacggtgagacc
aatgccaccctccgtcgcggtgacgagccggagacgctcaccgcggagcgggcctacgag
ctcatcgcggagaagcgcgccaaggggccgacgactcgcaagaagtcggcgaagaagacg
gccaagaagaccgcgaagaaggccacgaagtcgacggcgaagaaggccacgaagaaggcg
gctgccaagaaggcgtga
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