Jatrophihabitans telluris: M6D93_00460
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Entry
M6D93_00460 CDS
T08151
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jtl
Jatrophihabitans telluris
Pathway
jtl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jtl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M6D93_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jtl03019
]
M6D93_00460
03009 Ribosome biogenesis [BR:
jtl03009
]
M6D93_00460
Enzymes [BR:
jtl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M6D93_00460
Messenger RNA biogenesis [BR:
jtl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M6D93_00460
Ribosome biogenesis [BR:
jtl03009
]
Prokaryotic type
rRNA helicases
M6D93_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UQX88492
LinkDB
All DBs
Position
104795..106660
Genome browser
AA seq
621 aa
AA seq
DB search
MSTESADPTTAPDDTEQRPGFADLGLSAPVLQALSEVGYESPSPIQAATIPPLMAGRHVV
GLAQTGTGKTAAFALPILSRIDTSARKPQALVLAPTRELALQVAEAIGKYAHHLPELHVL
PIYGGQSYGIQLSGLRRGAQVIVGTPGRVIDHLEKRTLDLSELKFLVLDEADEMLNLGFA
EDVERILADTPDDKQVALFSATMPSQIRRLSKRYLTDAAEITVKNKTVTAANTRQRYVQL
AHSAKMDALTRFLEVEDFDAMIIFARTKSATEDVAERLRARGLSAAAINGDLVQAQRERT
IGQLKSGALDILVATDVAARGLDVERITHVVNYDIPADAESYVHRIGRTGRAGRSGDALM
FVTPRERHLLATIERATRQPITEIPLPSVEDVNAQRVAKFGDSITASLGSPEVALFRQLI
TDYERDHDVPVIEIAAALAVLSQDDKSFLLKPDPVQDRRPRERSTRGPEGAGSGARVAGQ
RKHRSEDGAAPEPRAGMAKYRLAVGRRHKVQPGAIVGALANEGGLSRQDFGHIDIRGDHT
LVDLPANLPADTYRALEKTRVSGQLIHLRLDDGPPPRRRDDNPVTGGGAPPYRDGKPSYS
DGGRPPYRQGEKPKKPRHRGQ
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgagtccgccgacccgacgaccgcccccgacgacaccgagcagcgacccggt
ttcgctgacctggggctctcagcgccggtcctgcaagccctgtccgaggtcggctacgag
tcaccctcgccgatccaggccgcgacgatcccgccgctgatggccgggcggcacgtagtc
ggtctcgcccagaccggtaccggcaagaccgccgccttcgccctgccgatcctgtcccgg
atcgacacctcggcccgcaagccacaggcgctcgtgctggcgccgacccgggagctggcc
ctgcaggtcgccgaggcgatcggcaagtacgcccatcacctgcccgaactgcacgtcctg
ccgatctacggcggccagagctacggcatccagctgtcgggactgcgccggggcgcacag
gtcatcgtcggaacgccagggcgggtcatcgaccacctggagaagcgaaccctcgacctg
tccgagctgaagttcctggtgctggacgaggccgacgagatgctcaacctcggtttcgcc
gaggacgtcgagcgaatcctggccgacaccccggacgacaagcaggtggcgctgttctcg
gcgacgatgccctcgcagatccgccggctgtccaagcgctatctcaccgacgccgccgag
atcacggtcaagaacaagacggtcaccgccgccaacacccgccagcgctacgtccagctc
gcgcactcggccaagatggacgcgctcacccgcttcctggaggtcgaggacttcgacgcg
atgatcatcttcgcgcgcaccaaatcggccaccgaggacgtggccgagcggctgcgtgcg
cgcggcctgtccgccgcagccatcaatggtgacctcgtccaagcccagcgcgaacgcacg
atcggccagctcaagagtggcgcgctggacattctcgtggccaccgacgtcgcggcccgc
gggctggacgtcgagcgcatcacgcacgtcgtcaactacgacatccccgccgacgcggag
tcctacgtccaccgcatcgggcgcacgggccgcgcgggccgttccggtgacgcgctgatg
ttcgtcacaccgcgcgagcgacacctgctcgccaccatcgagcgggcgaccaggcagccg
atcaccgagatcccgctgccgtcggtcgaggacgtcaacgcccagcgcgtcgccaaattc
ggggactcgatcaccgcaagcctcggctcacccgaggtcgccctgttccgccagctgatc
accgactacgagcgcgaccacgacgtgcccgtgatcgagatcgccgcggcgttggcggtc
ttgagccaggacgacaagtccttcctgctcaagccggatcccgtgcaggatcgccggccc
cgcgaacgcagcacccgcggacccgaaggcgccggctccggcgcgcgcgtcgccggccag
cgcaagcaccgttccgaggacggtgcggcacccgagccgcgcgccggaatggccaagtac
cggctcgcggtcggacggcggcacaaggtccagcccggcgccatcgtcggcgcgctggcc
aacgagggcggcctgagccgccaggacttcgggcacatcgacatccggggtgaccacacc
ctggtcgacctaccggccaacctgccggccgacacgtatcgcgcgctggagaagacccgg
gtctccggccagctcatccacctgcgcctggacgacggtccgccgccccgccgccgggac
gacaacccggtgaccggcggcggcgcaccgccgtaccgcgacggtaaaccttcctattcc
gacggtggcaggccgccgtaccggcagggcgagaagccgaagaagccgcgtcaccgcggg
cagtga
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