Jatrophihabitans telluris: M6D93_06880
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Entry
M6D93_06880 CDS
T08151
Name
(GenBank) DEAD/DEAH box helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jtl
Jatrophihabitans telluris
Pathway
jtl03420
Nucleotide excision repair
jtl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M6D93_06880
03430 Mismatch repair
M6D93_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jtl03400
]
M6D93_06880
Enzymes [BR:
jtl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M6D93_06880
DNA repair and recombination proteins [BR:
jtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M6D93_06880
MMR (mismatch excision repair)
Other MMR factors
M6D93_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UQX89720
LinkDB
All DBs
Position
1447938..1451198
Genome browser
AA seq
1086 aa
AA seq
DB search
MTALDLISPVELAARLGARFAPTEEQAAVIGAPLEPAVVIAGAGSGKTETMAARVVWLVA
NGLVDPERVLGLTFTRKAAGELQQRIRTRLSTLQRAQGPDHEPIGEPAVLTYAAYAGRLV
GEHGILLGAEPGARLLSEAARWQVADSTVRRYDGNFEIPPGVPASVTGYLLDLAGQLSDH
LVTPEELSSFSLDLLAELERLPLSPTSRGKPWPAESGAWVKTLLQRNELIPLLHRFAEQK
RREATVDFADQMVLAARLAETASVAEIERSRYDVVLLDEYQDTGHAQIHMLAALFADGRA
VTAVGDPLQSIYGWRGASAGNISRFAHKFRRRSGEPAPVYPLMTSWRNDRRILQAANAIA
APLRSAEDTSLTARPEATDGRLVVSFAETEPDEAQTLAEQFRHEWDERRDWTGAERTMAV
LVRKRSIIPGVAQALRDAGLPVEVVDLGGLLTLPEISDVVATLRVLIDSGAGGSLARLLA
GSRWRTGPADLVALHTRARLLARQTAVLLSRFSQPSHDSTPDPDLVQDERIEASLVEALA
DLGPADHYSAEGYRRMSALAGELRRLRRRLDLPLPDLIAEIERVTGLDVEVGVGRSGGRE
NLDRFADEAARFVSEREIGAGPAQVSAFLSFLVAAQDEEYGLKPAAAQVHSERVQVLTVH
GAKGLEWDVVAVAGMYEGGFPSTPKNHDWTRARSLLPAPLRGDRNDLPAISVGACTDRRE
LEQHVKHHHDALGDRYLGEERRLAYVALTRARKVLYASGAQWGNGKTPRKASTFLRELAA
LSLAGTAELGHWQEDEAAENPLLAERREVAWPRDPLAQHRPRLEEAARAVRSAIGHPVEG
YRPASPRAEFWQTDVDVLLAERAAQQARGLIEVTLPRQLSASDLVSLAENESEFARRIRR
PVPQQPARLARRGTAFHSWLEQRWSADTLLDLSEIPGAADEVIDDTELERLKRAFEASEW
GSRTPVAVEVPFELTLAGRVVRGRMDAVFSDADGRFTVVDWKTGRPPRGADARSKAVQLA
VYRLAWAGLQGLAGPELSRVGAAFHYVADNLTVAPLDLMDAEDLHTLLVSGPLPRAVTEP
TNRSAG
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgctcgatctgatcagcccggtcgagctggccgctcgcctcggcgcgcggttt
gccccgaccgaggagcaggccgccgtcatcggcgctccgctcgagccggccgtcgtgatc
gccggagctggatcgggaaagaccgagacgatggcggcgcgggtcgtctggctggtcgcc
aacggcttggtcgacccggagcgggtactcggcctgactttcacccgcaaggccgccggt
gagctccagcagcgcatccgcacgcgcctgtcgacgttgcagcgtgcgcaaggccccgac
cacgaaccgatcggcgaacccgctgtcctcacctacgccgcctacgccggccgactcgtc
ggcgagcacggcatcctcctcggagctgagccgggcgcacggctgctcagcgaggccgct
cggtggcaggtcgctgactcgaccgttcggcgctacgacggcaacttcgagattccaccc
ggcgttcctgcatcggtgacggggtacttgctggacctggccggccagctgtccgatcac
ctcgtcacccccgaggaactgtcgagtttcagccttgacttgctggccgaactcgaacgg
ctgccgctcagcccgacttcccgaggcaagccgtggccggccgagtccggtgcttgggtc
aagactctgctccagcgcaacgagctcatcccgttgttgcaccgctttgccgaacagaag
cgccgtgaggccacggtggacttcgccgaccaaatggtcctggccgcgcgcctggccgaa
acggcttcggtggcagagatcgagcggtcgcgttacgacgtggtgctgctcgatgaatac
caggacaccgggcacgcccagattcacatgctcgccgccctgttcgccgacggtcgggcc
gtcaccgccgtcggcgatcccttgcagtcgatctacggttggcgtggcgccagcgcggga
aacatcagccgcttcgcccacaagttccggcggcgcagcggagagcccgcgccggtgtat
ccactcatgacgagttggcgcaacgaccggcgaatcctgcaggccgcaaatgccatcgca
gcccccctgcggtcagcggaggacacctcgctcacagcgcggccagaggcgaccgacggt
cgtctcgtcgtcagcttcgccgagaccgagcccgacgaggcccagacattggcggaacag
ttccgtcacgaatgggacgagcgacgtgactggaccggggccgagcgcaccatggccgtg
ttggtccgcaaacgttcgataattcccggcgttgcgcaggcactacgcgatgcagggttg
ccggtcgaggtcgtggacctcggtggcctgctcaccctgcccgagatcagcgacgtggtc
gccacgctgcgcgttctgatcgattccggggccggcggatcactggcccggctgttggcg
gggtcccgatggcggaccggcccggccgatctggtcgccctgcatacgcgcgcccgactg
ctcgcgcggcagaccgccgtgctgctctcccgtttctcgcagccgagccacgactccacg
ccggatccggacctcgtccaggacgagcggatcgaggcttcgctggtcgaggcgctggcc
gacctcggccctgctgaccactactcggccgagggctaccggcgcatgtctgcgctggcc
ggtgagctgcgacggttgcggcgccgtctggacctgccgctgccggacctcatcgccgag
atcgaacgggtgaccggcctcgacgttgaggtcggcgtcggccgatccggtggccgggag
aacctggaccgcttcgccgatgaggccgctcggttcgtcagcgaacgcgagatcggcgcg
ggaccggcccaggtgagcgccttcctgtcgtttctggtggctgcgcaggacgaggaatac
gggctcaaacccgctgcggctcaggtgcacagcgagcgggttcaggtcctcacggtgcat
ggcgccaagggcttggagtgggacgtggtcgcggtggccgggatgtatgaaggcggcttt
ccgtccacgcccaagaaccacgactggacgcgcgcgcgatcgctgttgcccgccccgctg
cgcggcgatcgcaatgaccttccggcgatttccgtcggtgcctgtaccgaccggcgcgag
ctggaacagcacgtcaaacatcaccacgatgctctcggcgatcgctatctcggagaagag
cggcggctggcctacgttgccctgacccgcgctcgcaaggttctctatgcctcgggtgcg
cagtggggcaacggcaagaccccgcgcaaggcgtcgacgtttcttcgagagctggctgcg
ctgtcgctggccggtacggccgagcttgggcactggcaggaggacgaggcggcggagaat
ccgctgctggccgaacggcgcgaggtcgcctggccccgcgaccccctggcccagcaccga
ccgcggctggaggaggcggcccgcgccgtgcgctcggcgatcggacatccggtcgagggg
taccggccggccagcccccgcgcggagttctggcagacagacgtcgacgttctgctcgcc
gagcgtgccgcccagcaggcccgcggcttgatcgaggtgacgttgccgcgccagctgtcg
gcctcggacctggtgtcgttggccgagaacgagtccgagttcgcgcgccggatacgccgt
cccgtgccgcaacagcccgcccgtctggcccgccgtgggacggctttccacagctggctc
gaacagcgatggtcggccgacaccctgctcgacctgtcggagattcccggcgcggccgat
gaggtcatcgacgacaccgagctcgaacggctcaagcgggccttcgaggccagcgagtgg
ggcagtcgcacgccggtcgcggtcgaggtccccttcgaactcacgctggcgggccgcgtc
gtgcgtggccggatggatgctgtgttcagcgacgcggacggtcggttcacagtggtggac
tggaagaccgggcgtcccccgcgcggtgcggacgcccggtcaaaggccgtgcaactggcg
gtgtatcgactggcgtgggctggcttgcaaggtctcgcgggccccgagttgtcccgtgtc
ggcgcggctttccactacgtcgccgacaatctcacggtcgcccccctcgacctgatggac
gccgaggacctgcacacactactggtcagcgggccgctgccccgcgcggtcactgagccg
acaaacaggtcggccggttag
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