KEGG   Jatrophihabitans telluris: M6D93_10555
Entry
M6D93_10555       CDS       T08151                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
jtl  Jatrophihabitans telluris
Brite
KEGG Orthology (KO) [BR:jtl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jtl03400]
    M6D93_10555
Enzymes [BR:jtl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M6D93_10555
    5.6.2.6  RNA 3'-5' helicase
     M6D93_10555
DNA repair and recombination proteins [BR:jtl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M6D93_10555
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr Helicase_C WH2_Lhr ResIII AAA_25 AAA_22
Other DBs
NCBI-ProteinID: UQX86750
LinkDB
Position
2253135..2257673
AA seq 1512 aa
MATIPSTLFTPATRAWFEGAFAEPTPAQLGAWESIAAGRHTLVVAPTGSGKTLAAFLSAV
DRLTALPAPDDPAQRCRVLYVSPLKALAADVERNLRSPLVGISQAARRLGQAEPDVRVAT
RSGDTSPEDRRAFARHGADILITTPESLFLLLTSAARKALSGVETVIIDEVHAVAATKRG
SHLALSLERLDELLERPAQRIGLSATVRPIEEVANFLAGGRPVNIVQPPSDKRLELSVVV
PVEDLSTLGGGEPEPGVDPRTQSSIWPHVESRVLDLIDSHNSTIVFANSRRLAERLTSQL
NDLAAERDPDRGAVARAHHGSVSREQRQIVEEDLKAGRLPAVVATSSLELGIDMGAVDLV
IQVESPPSVAAGTQRLGRAGHQVGAASEGVIFPKYRGDLVESAVVAERIRAGQIESMRYP
RNPLDVLAQHIVSMVAMDELSVDDVERVVRRSAPFASLPHSALEAVLDMLAGRYPSDAFA
ELRPRLVWDRLTGELTPRGGAQRLAVTSGGTIPDRGMFAVFLAGSDGAGRRVGELDEEMV
YESRVGEVFLLGSSSWRIEDITHDRVLVTPAPGQLGKMPFWKGDSIGRPAELGRALGAFV
RELDTAPVEQAKARAQAAGLDEWAASNLLGYLADQRAATRQLPTDRTIVVERFRDELGDW
RLVIHSPFGAPVNAPWALAISTGLRERFGLDVQSMHSDDGIVLRLADTTAEPPGSDLVVF
DPEDIEAIVTGEVTNSALFASRFRECAARSLLLPKRDPRRRSPLWQQRQRAHALMEVAKN
FGQFPVVLEAMRECLQDVYDLPGLVELMRQLQRRQIKLVEVETSTPSPFAQSLLFGYVGM
FIYDADVPLAERRAQALTLDTSLLAELMGSPDLRDLLDEKAIAESVRDAQRLSESRRVSG
PDATSDLLREVGDLTTAEAEQRGATRTDLDTLRTTRRAIELRIGGEQRWLAIEDAGRVRD
ALGAALPVGVPETFTELVADPLGDLLTRFARTNGPFTVDAPATRLGLGTAVVAAHLERLV
ASGQVVAGEFTGEARARQYCGTTMLRTIRRKSLAALRREVEPVPQSVLAQFLPEWQGVGG
ARRSRGIDGLARVIEQLAGVPIPASALESLVLPARVSDYSPAMLDELTSAGEVIWAGHGS
LGKNDGWISLLPAEVAPLLLEPADDAGFTPQHKALLQLLDHGQALFIRSLSEQFAGSSEL
TEATTNRSIGANELSQLLWDLIWSGAVTNDTLAPVRARLATGRTSHSRRATAPRARYGRY
SRAAIAAVNRATEQAHSPAGAAMPGRWSQLPVPATEETARVLLRTEVLLDRYGLLLRGEV
AAESVPGGFSAVYPVLRQAEETGRYRRGYFVEGMGGAQFGVSGAVDRLREISARAGQATA
PGNECLVLAATDPANPYGAALEWPVRVVAADDEAEQRRGHQPGRKAGALVALIDGHCVLY
VERGGRTILSFTEDEAMLKVAATALADSVRTGALGRLHVEKADGERIATSPLGRALESAG
FRPSPRGLQLRG
NT seq 4539 nt   +upstreamnt  +downstreamnt
atggccaccatcccttcgacgctgttcacgcccgccacccgggcgtggttcgagggtgcc
ttcgctgagccgacgcctgcgcagctcggggcgtgggagtccatcgcggccggccgccac
acgctcgtggtggctccgaccggctcgggcaagaccctggccgcatttctctcggcggtg
gaccggctcaccgcccttcccgctccagacgatccggcgcagcgatgccgtgtcctgtac
gtcagccctttgaaggcactcgccgccgacgtcgagcgcaatctgcgctcacccttggtg
ggaatctcgcaggccgctcggcgcctgggtcaagccgaacccgacgtgcgcgtggcgacg
cgctcgggtgacacctcccccgaagaccgccgcgcctttgcccggcacggcgcggacatc
ctgatcaccacgcccgaatcgttgttcctgctgctcacttcggcggcacgtaaggcactg
agcggcgtcgagacggtcatcatcgacgaagtccacgccgtcgcagcgaccaagcgcggc
tcgcacctcgccctgagcctggagcgcctcgacgaattgctcgaacggcctgctcagcgg
atcggcttgtccgcgacggtgcgtccgatcgaggaggtcgccaacttccttgccggcgga
cgtccggtcaatatcgttcaacctccctccgacaagcgcctcgagctgtccgtggtcgtg
ccggtcgaggacctcagcaccctcggcggtggtgaacccgaacccggcgtcgacccccgc
actcagtcctccatctggcctcacgtcgagagccgggtgctggacctcatcgacagtcac
aactcgaccatcgtgttcgcgaactccaggcggctggccgagcggctgacctcccagctc
aacgacctggcagcggagcgtgaccccgaccgcggcgcggtcgcccgcgcccaccacgga
tcggtctcacgcgaacagcgccagatcgtcgaagaagatctcaaggccggccgcctgcct
gctgtcgtcgctacgtcttcgctcgagctgggcatagacatgggcgccgtcgatctcgtg
atccaggtcgagtccccgccgtcagtggccgccggcacgcaacggctcggccgcgccggt
caccaggtcggggccgcttccgaaggcgtgatctttccgaagtatcgcggagaccttgtg
gagtcggcggtcgtcgcggagcgtattcgcgccgggcagatcgagagcatgcggtacccc
cgcaatccactggacgtgctggctcagcacatcgtgtccatggtcgcgatggacgagctg
agcgtcgacgatgtcgagcgggtcgtgcgccgaagcgcaccgttcgcgtcgttgccgcac
tccgccctggaggccgtcctggacatgctcgcggggcgttatccgtctgatgcgttcgcc
gagctgcgcccgcgactggtctgggaccggctgaccggtgagctgaccccgcgcggcggt
gcccagcggctggcggtgacctccggcggaacgatcccggaccgcggcatgtttgccgtt
ttcctggccgggtccgacggcgcgggtcgccgggtgggtgagctggacgaggagatggtc
tacgagtccagggtgggtgaagttttcctgctgggctcgtcctcctggcggatcgaggac
atcacccacgatcgggtgctggtcacgccagcccccggtcagctgggcaagatgccgttc
tggaaaggcgactccatcggccggccggcggagctgggccgcgcgctgggcgcgttcgtg
cgcgagctggacaccgcgccggtcgagcaggccaaggcgagggcgcaggcagcgggcttg
gacgagtgggcggcctcgaacctgctcggctacctggccgaccagcgagcggcgacgcgc
cagttaccaaccgaccgaacgattgtcgtcgagcgcttccgcgacgaactcggcgactgg
cgtctggtgatccactccccgttcggtgctccggtcaacgcgccctgggcgttggcgata
tcgaccggcctgcgtgagcgtttcgggctcgacgtccagtcgatgcattccgacgacggg
atcgtgctgcggctggcggacacgaccgcagaacccccagggagcgacctcgtcgtcttc
gatcccgaggacatcgaggcgatcgtcaccggcgaggtgaccaactcggcgttgttcgcc
tcacgcttccgcgagtgcgccgcccggtcgttgttgctgcccaagcgcgatccgcgccgt
cgctcaccactgtggcagcagcgacaacgagcgcatgcactcatggaggtggccaagaat
ttcgggcagttcccggtcgtgctcgaagccatgcgtgagtgcctgcaggatgtgtatgac
ctgcccggactggtggagttgatgcgccagctccaacgacgccagatcaagctggttgag
gtcgagacatcgacaccgtcgcccttcgcccagtctctgctgttcggttacgtaggcatg
ttcatctacgacgcagacgtgccgttggccgaacgacgggcccaggcgctcacgctcgac
acctcgctgctggccgagctcatgggctcgcccgacctccgtgacctgctcgatgagaag
gcaatcgccgagtccgtccgcgatgcgcaacgcctgagcgagagcaggcgggtctccggt
cctgacgcgacctctgacctgctccgagaggtcggggatctgacgaccgccgaagcggaa
cagcgcggagctacccggaccgacctggacacgctccgaaccacccgtcgggccatcgag
ctccgcatcggcggcgagcaacggtggctggcgatcgaggacgcaggccgtgttcgcgac
gctctcggagccgcgctcccggtcggtgtccccgagacgttcaccgaactggtcgccgac
cctttgggcgacctgctcacgcgcttcgcccgcaccaacggaccgttcacggtcgacgct
cccgctacccgcctgggcttgggaaccgcggtcgtcgcagcccacttggaacggctggta
gccagcggtcaggtggtcgccggtgagttcaccggcgaggcgcgcgcccgccagtactgc
gggacgacgatgctgcgcaccatccgtcgcaaatcgctggccgccctgcgccgcgaggtg
gagccggtgccccagtccgtactcgcccagttcctgcctgagtggcaaggcgtcggcggc
gcgcgccgttcgagggggatcgacgggctggcccgcgtcatcgagcagctcgcgggcgtg
ccgattcccgcttcggccctcgagtccctggtgctgcccgcccgagtctcggactactcc
ccggcgatgctggacgaattgaccagtgccggtgaggtgatctgggccggccacggatca
ctcggcaagaacgacgggtggatctcgctcttgcccgcagaggtggcacccctgcttctg
gagccggccgacgacgctggattcaccccacaacacaaggcccttcttcaactgctggat
cacggtcaggcgttgttcatccgctcactgagcgagcagttcgcgggctccagcgagctg
accgaggccacgaccaaccggtcgatcggggcgaacgagctgagccagctcctgtgggac
ctgatctggtccggcgccgtcaccaatgacaccctcgccccggtgcgggcgcggctggcc
accggcaggacctcgcacagccgtcgggcaaccgctccccgagcgcgttacggccgctac
tcgcgcgccgcaatcgcagcggtgaacagagcgaccgaacaggctcactcgcccgccggc
gcggccatgcccggccgctggtctcaactgccggtgccggcaacggaagaaacggcgcgc
gtcctgctccgcaccgaggttctcctggaccggtatggcctcctgctgcgtggcgaggtg
gcggccgagtcggttccgggcggcttctccgcggtctaccccgtcctgcgccaggccgag
gagactgggcgctaccggcgcggttactttgtggagggcatgggcggggctcagttcggc
gtctccggtgcggtcgatcgcctgcgtgagatctctgctcgtgcgggccaggcgacggct
cctggaaacgaatgcctcgtgctcgcggctaccgacccagccaacccctatggggctgcg
ctcgaatggcccgtacgggttgttgcggctgacgacgaggccgagcagcgtcgcggccat
caacctggtcgaaaggccggcgccctcgtggccctgatcgacgggcactgcgtcctttac
gtcgaacggggcggccgcaccatcctgtcgttcaccgaggacgaagccatgctgaaggtg
gcagcgaccgcgctcgccgacagcgtccggacgggtgccctcggccgtctgcacgtcgag
aaggcggacggtgagcggatcgcgacctcgccgctcggtcgcgcgctcgagtcggcagga
ttccgaccgtcccctcgtggcctgcaattgagaggctga

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