Jatrophihabitans telluris: M6D93_12790
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Entry
M6D93_12790 CDS
T08151
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jtl
Jatrophihabitans telluris
Pathway
jtl03030
DNA replication
jtl03430
Mismatch repair
jtl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M6D93_12790 (dnaE)
03430 Mismatch repair
M6D93_12790 (dnaE)
03440 Homologous recombination
M6D93_12790 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtl03032
]
M6D93_12790 (dnaE)
03400 DNA repair and recombination proteins [BR:
jtl03400
]
M6D93_12790 (dnaE)
Enzymes [BR:
jtl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M6D93_12790 (dnaE)
DNA replication proteins [BR:
jtl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M6D93_12790 (dnaE)
DNA repair and recombination proteins [BR:
jtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M6D93_12790 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UQX87175
LinkDB
All DBs
Position
complement(2746003..2749557)
Genome browser
AA seq
1184 aa
AA seq
DB search
MSGPTGSNTGSNDSFVHLHVHTEYSMLDGAARLKDLFATTAEMGMPALAMTDHGNVFGAY
DFYRQAKAAGVNPIIGMEAYLTPNTHRGDRTRVRWSNGGEDDVSGAGAFTHMTLLAENTT
GMHNLFRLSSRSSLEGFFYKPRADRELLHTYSQGLIATTGCPSGEIQTWLRIGNYDNARA
SAAEFRDIFGKDNFFLELMDHGLGIETRVREGLIKLGRDLSLPMIATNDLHYTKPADADA
HEVLLCVQSGKTMADPNRFKFDAKDFYLKSPAEMRSLWADKYELREACDNTLLIAERCDV
SFNEAANYMPRFPVPEGEDETSWFIKEVEAGLLDRYPHGIPDEVRKQADYEVGVIVQMGF
PGYFLVVADFINWAKKNGIRVGPGRGSGAGSMAAYAMRITDLDPLRHGLIFERFLNPDRV
SMPDFDVDFDERRRGEVIRYVSDKYGDDRVAQIVTYGTIKAKQAVKDAARVLGYPFAMGD
RITKVMPPPVMGKDVPLSKIFDSSHERYGEGGEFRSLYEADPEVKKVVDTAQGLEGLKRQ
WGVHAAGVIMSSEPLVDVIPIMRREQDGAIITQFDYPSCEKLGLIKMDFLGLRNLTILDD
AVANIKANRNHELVLEDLELTDQATYELLARGDTLGVFQLDGGPMRALLRSMRPDNFEDI
SAVLALYRPGPMGANSHNEYADRKNDRKPVVAIHPELAEPLKDLLGDTYGLIVYQEQVMA
IAQQLAGYTLGAADLLRRAMGKKKKSELDAQYEIFSGGMKTNGYSAAAVKALWDVLLPFS
DYAFNKAHTAAYGVLSYWTGYLKANYPAEYMAALLTSVKDDKDKMAVYLAECRRMGIKVL
PPCVNSSDANFTPTGTDIRFGLSAVRNVGGNVVSSIVARRKEKQSYLDFADYLRKVDAVA
CNKRTVEALIKSGAFDSLGHTRRGLITVYEQSIDAVVDTKKAEAIGQFDLFGFGTEDSAA
ETDVFAVRVPDGEWDKSVLLNFEREMLGLYVSDHPLFGVEHILATAAEVSIADLQSDLVN
DGQTVTVAGILSGVTRRMTKDGKPWAQVALEDLEGAVEVLFFPASYAQVGMKIAEDAIVV
IKGRVDSREDTIRLIGSDLTLPDLTEGPNGPVKLQIAPSRCTPPMVERLRDVLRGHPGTT
EVHLELVSGERRHRYKLPDALRVTASPALMGDLKALLGPNSVAG
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcctaccggatcgaacaccggttccaacgactccttcgtccacctgcacgtc
cacaccgagtattcgatgctcgacggtgcggcgcggctgaaggacctcttcgcgaccacc
gcggagatgggcatgccggcgctggcgatgaccgaccacggcaacgtcttcggcgcttac
gacttctaccggcaggccaaggccgccggcgtgaatcccataatcgggatggaggcctac
ctcacacccaacacccaccgcggcgaccgcacccgggtgcgctggagcaacggcggcgag
gacgacgtatcgggtgccggggcgttcacccacatgacgctgctcgctgagaacaccacc
ggaatgcacaacctgttccgactgtcctcgcggtcgagcctggaaggcttcttctacaag
ccgcgagccgaccgcgaactcctgcacacctattcccagggcttgatcgcgacgaccggg
tgcccctcaggagaaatccagacctggctgcggatcggcaactacgacaacgcccgtgcc
agtgccgcggagttcagggacatcttcggcaaggacaacttcttcctggaactgatggat
cacggtctggggatcgagacccgggtccgcgagggactgatcaaactcggccgggatctc
agcctgccgatgatcgccaccaacgacctgcactacaccaaaccggccgatgctgacgcg
cacgaggtgctgctgtgcgttcagtcgggcaagaccatggccgacccgaaccggttcaag
ttcgatgccaaggacttctacctcaagtcgccggccgagatgcgctcgctctgggcggac
aagtacgagctgcgtgaagcctgcgacaacaccctgctcatcgccgagcgctgtgacgtc
agcttcaacgaagcggccaactacatgccgcgcttcccggtccccgagggcgaggacgag
acctcctggttcatcaaggaggtcgaggcgggtctgctggaccgctacccgcacggcatt
cccgacgaggtccgcaagcaggccgactacgaggtcggcgtcatcgtccagatgggcttc
cccggctacttcctcgtcgtcgccgacttcatcaactgggccaagaagaacggcatccgg
gtcggtcccggccgcggttcgggcgcgggttcgatggccgcctacgcgatgcgcatcacc
gacctggacccgctgcgccacggcttgatcttcgagcgattcctcaaccccgaccgggtg
tcgatgcccgacttcgacgtcgacttcgacgaacgtcggcggggcgaggtcatccgctac
gtcagcgacaagtacggcgacgaccgggtggctcagatcgtcacctacggcaccatcaag
gccaagcaggcggtcaaggacgccgcgcgggtgctcgggtacccgttcgcgatgggcgac
cggatcaccaaggtcatgccgcccccggtcatgggcaaggacgtcccgctgtcgaagatc
ttcgactccagccatgagcgctacggcgagggcggcgaattccggtccctgtacgaggcc
gaccccgaagtcaagaaggtcgtcgacaccgcccaaggtctggaaggactcaagcgacag
tggggtgtccacgccgcgggcgtgatcatgtcctccgaaccgctcgtcgacgtcataccg
atcatgcgccgcgagcaggacggcgcgatcatcacccagttcgactacccgtcctgcgag
aagctcggccttatcaagatggacttcctggggttgcgaaacctcacgatcctcgacgac
gcggtggccaacatcaaggccaaccgcaatcacgagctcgtgctggaggacctcgagctc
accgaccaggcgacgtacgagctgctggcccgcggtgacaccctgggggtctttcagctc
gacggcggaccgatgcgggccttgctccgatcaatgcgaccggacaacttcgaggacatc
tccgcggttctggccctgtatcgaccgggtccgatgggcgccaactcgcacaacgagtac
gccgatcgcaagaacgaccgcaagcccgtcgtggcgatccatccggagctggccgaaccg
ctcaaggacctgctcggcgacacctacggcctgatcgtctaccaggaacaggtcatggcg
atcgcgcagcagctcgccggttacacgctcggcgcggctgatctgcttcgtcgcgcgatg
ggcaagaagaagaagtccgagctggacgcccagtacgagatcttctccggtggcatgaag
accaacggttactcagcggctgcggtcaaggccctctgggacgtcctgctcccgttctcc
gactatgcgttcaacaaggcgcacaccgcggcctacggggtgctgtcctactggacgggc
tacctcaaggcgaactacccggccgagtacatggcggcgttgctgacctcggtcaaggac
gacaaggacaagatggctgtctacctggccgagtgtcggcggatgggcatcaaagtgttg
ccaccttgcgtgaactcctccgacgccaacttcaccccgacggggacggacatccgcttc
ggcctgtccgccgtccgcaacgtgggcggcaacgtggtgtcctcgatcgtggcccgccgc
aaggagaagcagagctatctcgacttcgccgactacctgcgcaaggtggacgcggtggcc
tgcaacaagcgcaccgtcgaggccttgatcaagtccggtgccttcgattccctcggccac
acccgacgcggcctgatcaccgtctacgaacagtccatcgacgccgtcgtcgacacgaag
aaggccgaagcgatcgggcagttcgaccttttcggcttcgggaccgaggattcggccgcc
gagacagatgtgttcgcagtccgggtgccggacggggaatgggacaagtccgtgctcctg
aacttcgagcgggagatgctcgggctctacgtttccgatcatcccctgttcggtgtcgag
cacatcctcgccaccgcggccgaggtcagcatcgccgatctgcagtccgacctggtcaac
gacggccagacggtgacggtcgccggcattctgtccggtgtcacgcgccggatgaccaag
gacggtaagccttgggcccaagtggccctggaggatctcgagggcgcggtcgaggtcctg
ttcttccccgcctcctacgcccaggtcggtatgaagatcgccgaggacgcgatcgtcgtg
atcaagggccgggtggacagccgtgaggacacgatccggctcatcggctccgacctgaca
ctgcccgatctcaccgaggggccgaacggcccggtcaagttgcagatcgcgccgtcgcgc
tgcacgccgccgatggtcgagcgactccgagacgtcctgcgcggccatcccggcaccacg
gaagtgcacctcgaactcgtcagcggtgagcgacggcatcgctacaaactgcccgacgcg
ttgcgggtcaccgcctcgccggcgctgatgggtgacctcaaggcgctgctcgggcccaac
tcggtcgccggctga
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