Janibacter terrae: V3C34_03005
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Entry
V3C34_03005 CDS
T10608
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jtr Janibacter terrae
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtr03032
]
V3C34_03005
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_03005
Enzymes [BR:
jtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V3C34_03005
DNA replication proteins [BR:
jtr03032
]
Prokaryotic type
DNA Topoisomerases
V3C34_03005
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V3C34_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SusD_RagB
Motif
Other DBs
NCBI-ProteinID:
XAS61266
LinkDB
All DBs
Position
complement(600898..601884)
Genome browser
AA seq
328 aa
AA seq
DB search
MRRSSPDEPGIRRRRAGRGFTYVHPDGRRVGAEVRARIEDLVIPPAWQDVWICTDPDAHL
LATGVDAAGRTQYLYHPRWREQQDRDKFDRVLTLAPALPTLRRAVRADLRSPGLTRARVT
GLALWLLDTGRLRVGSTAYEAEHGSHGATTLLTEHLHDRGDGVLLEFPAKGGQAASVAVQ
DEDVTRTLRGLRRAGRRGEHLMRYREGGERHDLAPRHVTDRFVELVGEEHTVKDLRTWAA
TVTAAEALARAARGGGDPDDIERAALQAAADSLGDTLTVARDSYVDPRVLAAHRAGRHVR
PTRGQPLEHSDTVRRRVERELVALLRAT
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcagcagccccgacgagcccggcatccgccggcgacgcgccggacgggggttc
acgtacgtccaccccgacgggcgccgggtcggcgccgaggtacgcgcccgcatcgaggac
ctcgtcatccctcctgcctggcaggacgtgtggatctgcaccgaccccgacgcccacctc
ctggccaccggcgtcgacgccgccggccggactcagtacctgtaccacccgcggtggcgc
gagcagcaggaccgggacaagttcgaccgggtcctcaccctcgcaccggccctgcccacc
ctgcgtcgtgccgtgcgcgccgacctgcggtcaccggggctgacccgcgcccgcgtcacc
ggcctggccctgtggttgctcgacaccggccggctgcgggtcgggtcgaccgcgtacgag
gcggagcacgggtcgcacggggccaccacactgctcaccgagcacctccacgaccgcggc
gacggcgtcctcctcgagttcccggcgaaggggggccaggccgcctcggtcgcggtgcag
gacgaggacgtgacccggaccctgcgcggcctgcgccgcgccggtcgtcgcggcgagcac
ctcatgcgctaccgcgaagggggcgagcgccacgacctcgccccacgccacgtcaccgac
cggttcgtcgagctcgtcggcgaggagcacacggtcaaggacctgcgcacgtgggcggcg
accgtcaccgccgcagaggccctggcgcgcgccgcccgcggcggtggcgaccccgacgac
atcgagcgcgcggcgttgcaggccgccgcggactcgctcggtgacaccctcacggtcgcc
cgcgacagctacgtcgacccacgcgtcctagcggcgcaccgcgcggggcgccacgtccgg
cccacgcggggccagccgctcgagcacagcgacaccgtgcggcgacgggtcgagcgcgag
ctcgtggcgctgctcagggcgacctga
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integrated database retrieval system
