Janibacter terrae: V3C34_03155
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Entry
V3C34_03155 CDS
T10608
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jtr Janibacter terrae
Pathway
jtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V3C34_03155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_03155
Enzymes [BR:
jtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V3C34_03155
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V3C34_03155
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V3C34_03155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
DUF6415
NFACT_N
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
XAS61295
LinkDB
All DBs
Position
complement(630473..631333)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVQRLVDVLGERLSGLAVERLELASFSVLKTFDPPPQALEGAPVDGVHRHGKFID
IDCDGTHLVIHLARAGWIRWSDELPGTPLRPGKSPIALRVRLVDGSGFDVTEAGTKKSLA
AYLVRDVQEVPGIARLGPDPLSGELTREAFGVLLAGRKTQIKGVLRDQSLIAGVGNAYSD
EVLHAARLSPFALASSLTEEEVDTLHEALRTTLTEAIAAASGKAAAELKDAKRSGMRVHG
RTGEACPVCGDVVREVSFADRSLQYCATCQTGGKPLADRRTSKFLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgccggaggtccagcggctcgtcgacgtgctcggcgagcggctctccggc
ctggccgtcgagcgcctggagctcgcgtccttctccgtgctcaagaccttcgacccgccg
ccgcaggcgctcgagggcgcccccgtcgacggggtccaccgccacggcaagttcatcgac
atcgactgcgacgggacgcacctcgtcatccacctggcccgcgccggctggatccgctgg
tccgacgagctgcccggcacaccactgcgccccggcaagtcgccgatcgcgctgcgcgtg
cggctcgtcgacgggtcgggcttcgacgtcaccgaggcggggaccaagaagtccctcgcc
gcctacctcgtgcgtgacgtccaggaggtccccggcatcgcccgcctgggtcccgacccg
ctctccggcgagctgacccgcgaggccttcggcgtcctcctcgccggacgcaagacgcag
atcaagggggtgctgcgcgaccagtcgctcatcgccggcgtgggcaacgcctactccgac
gaggtcctgcacgcggcgcggctgtcccccttcgccctcgcctcgtcgctgacggaggag
gaggtcgacacgctccacgaggcgctgcgcacgaccctcaccgaggcgatcgccgccgcg
tcgggcaaggccgcggccgagctcaaggacgccaagcgctcggggatgcgggtgcacggg
cggaccggcgaggcctgcccggtctgcggtgacgtcgtgcgcgaggtgagcttcgccgac
cgctcgctgcagtactgcgccacctgccagacgggcggcaagccgctcgcggaccggcgc
acgagcaagttcctcaagtag
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