Janibacter terrae: V3C34_05685
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Entry
V3C34_05685 CDS
T10608
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
jtr Janibacter terrae
Pathway
jtr03020
RNA polymerase
Brite
Enzymes [BR:
jtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V3C34_05685
Transcription machinery [BR:
jtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V3C34_05685
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V3C34_05685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAS61785
LinkDB
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Position
1129779..1133657
Genome browser
AA seq
1292 aa
AA seq
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MLDVNFFDELRIGLASAEDIRNWSHGEVKKPETINYRTLKPEKEGLFCERIFGPTRDWEC
SCGKYKRVRFKGIICERCGVEVTRAGVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDVDQRHTDLPSLEAQIEAEKKELENRRDADVETRAQKLEKD
IAELEAEGAKSDAKRKVRDSAEREMNQIRKRADQQVERLSQVWDRFKNLKVQDLEGDEVL
YREMRDRFGLYFEGGMGAAAIQKRLETFDLEAESDKLREIIATGKGQKKTRALKRLKVVT
AFLTTDNKPAGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDNLFDNGRRGRAVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLDHAQNIKSAKRMVERHR
SVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMIIGLFHLTSEVDLETEHPR
AFSSTAEARMAYDAGAIKIGTPIRVRLHDIVPTAGQLPEGAETDEQGRVTSWTAETTLGR
ALFNGTLPEDYPFVNEPVDRKRLSTIVNDLAERYTKVQVAASLDALKEAGFHWASRSGTT
VALSDVVTPPRKPEILAAYEEKATKVQKQYERGLITDDERRQEQIEIWTQATNEVSAEMQ
ENFPKDNPIYRMVSSGARGNWFQLRQIAGMRGLMANPKGEIIPRPIRTNFREGLSVVEFF
ISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLTMPIAQFDELTGT
RRLHDDVEFTVYARCVASDVEHEGQVLAPAGSDLGDVVIDRLYKAGVDEVKIRSVLTCES
KVGTCAKCYGRSLATGQLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLP
RVVELFEARTPKGVAPIAEADGKVTIEETDKGRRLLLVADRDGEEHAYPVSKRSRLLIED
GQRVEVGTQLVQGAIDPKQVLRILGPRQAQKHLVDEVQNVYRQQGVSIHDKHIEVIVRQM
LRRITILESGDTGLLPGMLAERGRFETENRRVVSEGGRPASGRPELMGITKASLATDSWL
SAASFQETTRVLTEAAMEGRSDPLLGLKENVILGKLIPAGTGLPRYRNVDVEPTEEAKAA
MYSLPSYDEYAYPVFGPGSGEAIRLDDLDLDV
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgacgagctgcgcatcggtctggcctccgcggaggacatc
cgtaactggagccacggcgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cctgagaaggagggcctcttctgcgaacggatcttcggtccgacgcgggactgggagtgc
tcctgcggcaagtacaagcgggtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccggcgtgcgtcgtgagcggatgggccacatcgagctcgccgccccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcctggggtacctgctcgacctg
gccccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgagcgtcgac
gtggaccagcgccacaccgacctgccctcgctcgaggcccagatcgaggccgagaagaag
gagctcgagaaccgccgcgacgcggacgtcgagacccgcgcgcagaagctcgagaaggac
atcgccgagctcgaggccgagggcgccaagtccgacgccaagcgcaaggtccgcgactcc
gccgagcgcgagatgaaccagatccgcaagcgtgccgaccagcaggtcgagcgcctctcc
caggtctgggaccggttcaagaacctcaaggtccaggacctcgagggcgacgaggtcctc
taccgcgagatgcgcgaccgcttcggtctgtacttcgagggcggcatgggtgccgcggcg
atccagaagcgtctggagaccttcgacctcgaggccgagtccgacaagctgcgcgagatc
atcgccaccggcaaggggcagaagaagacccgtgcgctcaagcgcctcaaggtcgtcacc
gccttcctcaccaccgacaacaagcccgcgggcatggtcctggatgccgtcccggtcatc
cccccggacctgcgcccgatggtccagctcgacggtggccggttcgccacgtccgacctg
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgcctgctcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacaac
ctcttcgacaacggtcgtcgtggtcgcgcggtcaccggcccgggcaaccggccgctgaag
tccctgtccgacatgctcaagggcaagcagggtcgcttccgtcagaacctcctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggccatggcgctcgagctcttcaagcccttcgtcatgaagcggctc
gtggacctcgaccacgcccagaacatcaagtcggccaagcgcatggtcgagcggcaccgt
tccgtggtctgggacgtcctcgaagaggtcatcaccgagcacccggtcctgctcaaccgc
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagctcatcgagggcaag
gccatccagatccacccgctcgtctgcaccgccttcaacgcggacttcgacggtgaccag
atggccgtccacctcccgctgagcgccgaggcgcaggccgaggcccggatcctgatgctc
tcgagcaacaacatcctcaagccggccgacggtcgacccgtcacgatgccgacccaggac
atgatcatcgggctcttccacctcacctccgaggtggacctggagaccgagcaccctcgc
gccttctcctcgacggccgaggcccgcatggcctacgacgccggggcgatcaagatcggc
acgccgatccgggtccgcctgcacgacatcgtccccacggccggtcagctccccgagggc
gccgagaccgacgagcagggtcgcgtcaccagctggaccgcggagaccaccctcggccgc
gccctgttcaacgggacgctgccggaggactaccccttcgtcaacgagccggtggaccgc
aagcgcctgtcgacgatcgtcaacgacctcgccgagcgctacaccaaggtgcaggtcgcg
gcctccctggacgccctcaaggaggccggcttccactgggcctcccgctcgggcaccacg
gtcgcgctgtccgacgtcgtcacgccgccgcgcaagcccgagatcctcgcggcctacgag
gagaaggcgaccaaggtccagaagcagtacgagcgcggtctgatcaccgacgacgagcgt
cgccaggagcagatcgagatctggacccaggccaccaacgaggtctccgcagagatgcag
gagaacttcccgaaggacaacccgatctaccggatggtctcctcgggtgcccgtggtaac
tggttccagctgcgtcagatcgccggtatgcgcggcctcatggccaacccgaagggcgag
atcatcccgcgcccgatccgcacgaacttccgtgagggtctgtccgtcgtcgagttcttc
atctcgacgcacggtgcgcgcaagggactggccgacaccgcccttcgtaccgccgactcc
gggtacctcacccgtcgtctcgtcgacgtctcccaggacgtcatcgtccgcgaggacgac
tgcgggaccgagcgcggcctgacgatgccgatcgcgcagttcgacgagctcaccggcacc
cgtcgcctccacgacgacgtcgagttcaccgtctacgcgcgctgcgtcgccagtgacgtg
gagcacgagggccaggtcctggcgccggccgggtccgacctcggtgacgtcgtcatcgac
cgcctctacaaggcgggtgtcgacgaggtcaagatccgctcggtcctcacctgcgagtcc
aaggtcggtacgtgcgccaagtgctacggccgcagcctggccaccggccagctcgtcgac
atcggcgaggccgtcggcatcatcgcggcccagtcgatcggtgagcccggcacccagctg
acgatgcggaccttccacaccggtggtgtggcaggtgacgacatcacgcagggtctgccg
cgtgtcgtcgagctcttcgaggcgcgcacccccaagggtgtggccccgatcgccgaggcc
gacggcaaggtcacgatcgaggagaccgacaagggtcgtcgtctcctgctcgtcgcggac
cgcgacggcgaggagcacgcctaccccgtgagcaagcgttcacgcctgctcatcgaggac
ggtcagcgcgtcgaggtcggcacccagctcgtccagggcgccatcgacccgaagcaggtc
ctgcgcatcctgggcccgcgccaggcgcagaagcacctggtcgacgaggtgcagaacgtc
taccgccagcagggtgtgtcgatccacgacaagcacatcgaggtcatcgtccggcagatg
ctgcgccggatcacgatcctcgagtcgggggacaccggtctgctcccaggcatgctcgcc
gagcggggtcgcttcgagaccgagaatcgtcgcgtcgtctccgagggcgggcgcccggcc
tcgggtcgtccggagctcatggggatcaccaaggcctcgctggccacggactcctggctc
tccgccgcctccttccaggagacgacccgcgtcctcaccgaggccgcgatggagggtcgc
tccgacccgctgctgggtctgaaggagaacgtcatcctcggcaagctcatccccgccggt
acgggcctgccccgctaccgcaacgtggacgtcgagcccaccgaggaggccaaggcggcg
atgtactcgctgcccagctacgacgagtacgcctacccggtcttcggtcccggttcgggc
gaggcgatccgcctcgacgacctcgacctggacgtctga
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