Janibacter terrae: V3C34_07670
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Entry
V3C34_07670 CDS
T10608
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
jtr Janibacter terrae
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtr03032
]
V3C34_07670
03036 Chromosome and associated proteins [BR:
jtr03036
]
V3C34_07670
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_07670
DNA replication proteins [BR:
jtr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V3C34_07670
Chromosome and associated proteins [BR:
jtr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
V3C34_07670
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
V3C34_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
XAS62165
LinkDB
All DBs
Position
1546690..1547337
Genome browser
AA seq
215 aa
AA seq
DB search
MNKAELVKALEERLGSRKAAQEALEVVLDTIVREVAKGGRVAITGFGTFEKAARAARTGR
NPRTGEVVKIKKTSVPRFKAGTSFKGYVADPRSLPKAAPAAARAAAGTVTSVAGAIADTA
IPGRKPARKTTTTTAKKSGPAKKSTPAKKTATKSTAKKAAPAKKSAAAKKAATKSTAKKA
ATKSTATSSTPAKKTTAKKATAKKTTAKKTTSSGS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcagaactggtcaaggctctcgaagagagactcggtagccgcaaggccgcc
caggaggcactcgaggtcgtgctcgacacgatcgtgcgggaggtcgccaaggggggccgc
gtcgccatcacgggattcggcaccttcgagaaggcggcccgcgcggcccgtaccggccgc
aacccgcgcaccggtgaggtcgtcaagatcaagaagacgtccgtgccgcgcttcaaggcc
gggacgagcttcaagggatatgtcgccgacccgcgctcgctccccaaggcggcgccggcc
gccgcccgggccgccgccgggaccgtcacctccgtcgccggcgcgatcgcggacaccgcg
atcccgggccggaagccggcgaggaagaccacgacgaccaccgccaagaagtccggcccg
gcgaagaagtcgactccggcgaagaagaccgcgacgaagtccacggcgaagaaggccgcg
ccggcgaagaagtccgcggcggcgaagaaggccgcgacgaagtccacggcgaagaaggcc
gcgacgaagtcgacggccaccagctccacgcccgccaagaagacgacggcgaagaaggcc
accgccaagaagacgacggccaagaagacgacgtcgagcggcagctga
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