Janibacter terrae: V3C34_09640
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Entry
V3C34_09640 CDS
T10608
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jtr Janibacter terrae
Pathway
jtr03030
DNA replication
jtr03430
Mismatch repair
jtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V3C34_09640
03430 Mismatch repair
V3C34_09640
03440 Homologous recombination
V3C34_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtr03032
]
V3C34_09640
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_09640
Enzymes [BR:
jtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V3C34_09640
DNA replication proteins [BR:
jtr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V3C34_09640
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V3C34_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
UVR
Rv2179c-like
RNase_H_2
DEDDh_C
DUF7508
TarS_linker
Motif
Other DBs
NCBI-ProteinID:
XAS59211
LinkDB
All DBs
Position
complement(1977548..1979239)
Genome browser
AA seq
563 aa
AA seq
DB search
MEVVQDRLGDLGTPLAEVTFVVVDLETTGGSPRDCGITEIGAVKVRGGVELGELQTFVNP
GEPIPAFIQSLTGITDAMVRDAPRTGEAVASFLEFAKGAVLVAHNAGFDIGFLKAACAAH
DLRWPAPQVLDTVRLARQVVSRDEVPNHKLATLARVFGATTTPDHRALHDARATVDVLHG
LIGRLGSVGVDTLEELGSYTSRVSDEVRRKRVLADGLPSAPGVYVFKDDRGEALYVGTSV
DIRSRVRSYFTASEQRRRMGEMVRLATEVTPIVCATTLEAQVRELRLIAAHKPRYNRRSR
HPEKVWWLKLTDEAFPRLSIVRSVGPDDLAYAGPFGSRSGAEDAMAALHDAVPLRQCLTR
ISPRRPTSACALADMGRCAAPCTGAVGVDEYAVTVGEAVDVLVGDSRAAVAAVRQRMTTL
SGDERYEEAAALRDRLAALVRAASRTQRAAPVRQAAEIVAARRTPRGGWDLVCVRHGRLA
GSSHSPVGADPMPYVAALRASAEVVAAPTAPGTGALAEETELVLRWLEAEGTRLVDIEGE
WTCPVGGAAAAHGELAPALGWAS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgtccaggacaggctcggtgatctcggcacaccactggccgaggtcaccttc
gtcgtcgtcgacctcgagacgacgggcgggtcaccgcgcgactgcgggatcaccgagatc
ggcgcggtcaaggtccgcggtggcgtggagctgggcgagctgcagaccttcgtcaacccg
ggtgagccgatccccgccttcatccagtcgctcaccggcatcaccgacgccatggtccgc
gacgcaccgcgcaccggggaggcggtggccagcttcctcgagttcgcgaagggagcggtg
ctcgtcgcgcacaacgcgggcttcgacatcggcttcctcaaggccgcgtgcgccgcccac
gacctgcggtggccggccccgcaggtgctcgacacggtacggctggcgcgacaggtggtc
tcccgggacgaggtccccaaccacaagctggcgacgctggcacgtgtcttcggggcgacg
acgacgccggaccaccgggcgctgcacgacgcccgcgcgacggtcgacgtcctccacggc
ctcatcggacggctcggctccgtcggcgtcgacacgctcgaggagctcggctcctacacc
tcgagggtgagcgacgaggtgcggcgcaagcgggtgctcgccgacggcctgccctcggcc
ccgggggtctacgtcttcaaggacgaccggggcgaggccctctacgtggggacctccgtc
gacatccgctcgcgcgtgcgctcgtacttcaccgcctccgagcagcgccgacgcatgggt
gagatggtgcgtctggcgaccgaggtgacgccgatcgtctgcgcgaccaccctcgaggcc
caggtgcgcgagctgcggctcatcgccgcccacaaaccccgctacaaccgccgctcgcgc
cacccggagaaggtgtggtggctgaagctgaccgacgaggccttcccccggttgtcgatc
gtgcgcagcgtcgggccggacgacctggcctacgccggacccttcggctcgcggagcggc
gccgaggacgcgatggccgccctgcacgacgcggtgccgctgcgccagtgcctgacgcgc
atctccccgcgccgcccgacgtcggcgtgcgccctggctgacatgggtcggtgcgcggcc
ccgtgcacgggcgcggtgggcgtcgacgagtacgccgtcaccgtcggcgaggccgtcgac
gtgctcgtcggcgactcccgcgcggccgtggcggcggtgcggcagcggatgaccacgctc
tccggggacgagcgctacgaggaggcggccgcgctgcgcgaccggctcgcggccctcgtc
cgcgccgcgtcgcgcacccagcgcgccgcgccggtgcggcaggcggcggagatcgtcgcg
gcccgccgtaccccgcgcggcggctgggacctcgtgtgcgtgcgccacggccggctcgcc
ggcagctcgcactcccccgtcggcgccgacccgatgccctacgtcgcggcgctgcgggcc
agcgccgaggtcgtcgccgcaccgaccgcacccgggaccggggcgctcgccgaggagacc
gagctggtcctgcgctggctcgaggccgagggcacccgcctggtcgacatcgagggcgag
tggacctgccccgtgggaggcgcagcggccgcccacggcgagctggcgcctgctctaggg
tgggcctcgtga
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