Janibacter terrae: V3C34_09785
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Entry
V3C34_09785 CDS
T10608
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
jtr Janibacter terrae
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtr03032
]
V3C34_09785
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_09785
Enzymes [BR:
jtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
V3C34_09785
DNA replication proteins [BR:
jtr03032
]
Prokaryotic type
DNA Topoisomerases
V3C34_09785
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V3C34_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
SF-assemblin
Phage_Gp84
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-ProteinID:
XAS59238
LinkDB
All DBs
Position
2005480..2007615
Genome browser
AA seq
711 aa
AA seq
DB search
MPPAATTAKKTASSKSVQDYSAHHLQVLEGLEAVRKRPGMYIGSTDQRGLMHCMWEIIDN
AVDEALGGHGDRIEVILHGDGSVEVRDNGRGIPVDIEPRTGLTGVEVVYTKLHAGGKFGG
GSYTASGGLHGVGASVVNALSSRLDVEVDRGGKTYAMSFRRGEPGTFSDVAGAKGVKSPD
HDFVAYDKGSELEVIGKAGRGVTGTRVRYWADPQIFLKGAELDGEALAARARQTSFLVPG
LTLVVRDARGDEPVEEVFHHDGGISEFVEFLAPDAPVTDVWRLEGTGTFTETVPVLDAKG
HMTPTDVERECGVDIAVRWGTGYDAKVSSFVNIIATPKGGTHVAGFEQALLKVFRKQLEV
NARKLKVGNDKVDKDDILAGLTAVVTVRLAEPQFEGQTKEVLGTNAVRSIVTKVVETELT
SLLTSTKRAEKQMAGQLLDKVVAEMKSRISARLHKETQRRKNALETSSLPPKLRDCRSTD
VEATELFIVEGDSAMGTAKEARNSEFQALLPIRGKILNVQKAAVGDMLKNAECASIIQVI
GAGSGRSFDVDAARYGKVIIMTDADVDGAHIRTLLLTLFFRYMRPLVEAGKVFAAVPPLH
RIEVVNPGSKKNELIYTYSEAEMRKKLASLGSRGKNIKQPIQRYKGLGEMDADQLAETTM
DPRHRMLRRVTTADLEAAEEVFELLMGKDVDPRRDFIVSSADQLDRERIDA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgcctccggcagccaccaccgccaagaagaccgccagcagcaagtcggtccaggactac
tccgcgcaccacctgcaggtgctcgagggtctcgaggccgtgcgcaagcggcccggcatg
tacatcggctcgaccgaccagcgcggcctcatgcactgcatgtgggagatcatcgacaac
gcggtcgacgaggcgctcggcggccacggcgaccgcatcgaggtcatcctccacggcgac
ggctcggtcgaggtccgcgacaacggccgcggcatccccgtcgacatcgagccgcgcacc
ggtctcaccggcgtcgaggtcgtctacaccaagctgcatgcgggcgggaagttcggcggc
ggctcgtacaccgcctccggcggcctccacggcgtcggcgcctccgtcgtcaacgccctc
tcctcccgcctggacgtcgaggtggaccgcggaggcaagacctacgcgatgagcttccgc
cgcggcgagcccggcaccttctccgacgtcgcgggggcgaagggggtcaagtcgcccgac
cacgacttcgtcgcctacgacaagggcagcgagctcgaggtcatcggcaaggccgggcgc
ggcgtcaccggcacccgggtgcgctactgggccgacccgcagatcttcctcaagggcgcc
gagctcgacggcgaggccctcgccgcgcgcgcccgtcagacctccttcctcgtgcccggc
ctcacgctcgtcgtgcgcgacgcgcgtggcgacgagccggtcgaggaggttttccaccac
gacggcggcatcagcgagttcgtcgagttcctcgcaccggacgcgccggtcaccgacgtg
tggcggctcgagggcaccggcaccttcaccgagaccgtgccggtcctcgacgccaaggga
cacatgacccccaccgacgtcgagcgggagtgcggtgtcgacatcgcggtacgctggggg
accgggtacgacgccaaggtctcctccttcgtcaacatcatcgccacgccgaagggcggc
acgcacgtcgcgggcttcgagcaggcgctgctcaaggtcttccgcaagcagctcgaggtc
aacgcccgcaagctcaaggtcggcaacgacaaggtcgacaaggacgacatcctcgcgggc
ctgaccgctgtggtcacggtgcgtctggccgagccgcagttcgaggggcagaccaaggag
gtgctcggcaccaacgccgtgcgctccatcgtcaccaaggtcgtggagaccgagctgacg
agcctgctcacctcgaccaagcgcgccgagaagcagatggccggccagctgctcgacaag
gtcgtcgccgagatgaagtcgcggatctcggcgcggctgcacaaggagacccagcgccgc
aagaacgcgctcgagacctcgtcgctgccgccgaagctgcgcgactgccgcagcaccgac
gtggaggccaccgagctcttcatcgtcgagggcgactcggcgatgggcacggccaaggag
gcgcgcaacagcgagttccaggcgctgctgccgatccgcggcaagatcctcaacgtgcag
aaggccgccgtcggggacatgctcaagaacgccgagtgcgcctcgatcatccaggtcatc
ggtgccggctccgggcgcagcttcgacgtcgacgccgcccgctacggcaaggtcatcatc
atgaccgacgccgacgtcgacggcgcccacatccgcaccctgctgctcacgctcttcttc
cggtacatgcgtccgctcgtcgaggccggcaaggtcttcgcggccgtgccgccgctgcac
cgcatcgaggtggtcaacccgggctcgaagaagaacgagctgatctacacctactccgag
gccgagatgcgcaagaagctcgcctcgttgggctcccgcggcaagaacatcaagcagccc
atccagcgctacaagggcctgggggagatggacgccgaccagctcgccgagaccacgatg
gacccccgccaccggatgctgcgccgggtgacgacggccgacctcgaggccgccgaggag
gtcttcgagctgctgatgggcaaggacgtcgatcccaggcgcgacttcatcgtctcctcg
gcggaccagctcgaccgggagcgcatcgacgcctga
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