Janibacter terrae: V3C34_10325
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Entry
V3C34_10325 CDS
T10608
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
jtr Janibacter terrae
Pathway
jtr00750
Vitamin B6 metabolism
jtr01100
Metabolic pathways
jtr01240
Biosynthesis of cofactors
Module
jtr_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
V3C34_10325 (pdxS)
Enzymes [BR:
jtr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
V3C34_10325 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
NanE
His_biosynth
IGPS
Glu_synthase
DHO_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
XAS59336
LinkDB
All DBs
Position
2123084..2123980
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AA seq
298 aa
AA seq
DB search
MGDETTETGTARVKRGMAEMLKGGVIMDVVTPDQAKIAEDAGAVAVMALERVPADIRAQG
GVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQVLQALGVDYIDESEVLTPADYANHI
DKWNFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRQIRQQIRHLQG
LPEDELYVAAKELQAPYELVKEVATAGKLPVVLFTAGGIATPADAAMMMQLGAEGVFVGS
GIFKSGNPAQRAEAIVKATTFYDDPDTLAKVSRGLGEAMVGINVDEIPQPHRLAERGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgagacgaccgagaccgggaccgcgcgggtcaagcgcggcatggccgagatg
ctcaagggcggcgtcatcatggacgtcgtcaccccggaccaggcgaagatcgccgaggac
gcgggcgcggtcgccgtgatggccctcgagcgtgtcccggccgacatccgtgcccagggt
ggggtctcgcggatgagcgacccggacatgatcgacgggatcatcgaggccgtctcgatc
ccggtcatggccaaggcgcgcatcgggcacttcgtcgaggcgcaggtcctgcaggccctc
ggcgtcgactacatcgacgagtccgaggtgctcaccccggccgactacgccaaccacatc
gacaagtggaacttcaccgtccccttcgtctgtggtgcgaccaacctcggggaggcgctg
cggcgtatcaccgagggcgcggcgatgatccgctccaagggtgaggccggcaccggcgac
gtctccaacgccaccacgcacatgcgccagatccgccagcagatccgccatctccagggt
ctgcccgaggacgagctctacgtcgcagccaaggagctgcaggcgccgtacgagctcgtc
aaggaggtcgcgaccgcgggcaagctgccggtcgtgctcttcaccgctggtgggatcgcg
accccggccgacgccgcgatgatgatgcagctcggcgccgagggcgtcttcgtcggctcc
ggcatcttcaagtccggcaacccggcgcagcgcgccgaggcgatcgtcaaggcgacgacc
ttctacgacgaccccgacaccctggccaaggtctcccgcggcctcggcgaggcgatggtc
ggcatcaacgtcgacgagatcccgcagccgcaccgcctcgccgagcgcggttggtga
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