Janibacter terrae: V3C34_13310
Help
Entry
V3C34_13310 CDS
T10608
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
jtr Janibacter terrae
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jtr03009
]
V3C34_13310 (rimO)
Enzymes [BR:
jtr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V3C34_13310 (rimO)
Ribosome biogenesis [BR:
jtr03009
]
Prokaryotic type
ribosomal protein modification factors
V3C34_13310 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XAS59898
LinkDB
All DBs
Position
complement(2693185..2694588)
Genome browser
AA seq
467 aa
AA seq
DB search
MSVPTRSVALVTLGCTRNDVDSEELAGRLSAEGWTLVDDAAEADVAVVNTCGFIEQAKKD
SIDAILEANDLREHGRTQKVVAVGCLAERYGKELADELPEADAVLGFDSYADMSSHLRAV
LDGHAPEAHTPGDRRRLLPISPVERDASELSVPGHGAGDLPRARLDDKPWAPLKIASGCD
RRCAFCAIPAFRGAFVSRRPSDVVAEGRWLATQGVRELFLVSENSTSYGKDLGDLDLLEQ
VLPELTTIEGIERVRVSYLQPAEIRPGLLRAMASTEGVVPWYDISFQHASGPLLRRMRRF
GDTDSFLGLIEGIRERQPEAGIRSNVIVGFPGETEEDVAELERFLVGARLDVVGVFGYSD
EDGTEGELLTDKIDPDVIATRVDRLTRLVEELTAQRAEERIGQVVEVLVEDVDEESGEVS
GRAAHQGPDVDGVTLLTGALEGVEIGAFVAAEVVGTEGIDLVAEVLA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccccacccgtagcgtcgccctcgtcaccctggggtgtacccgtaacgacgtg
gactccgaggagctcgccgggcgcctgtcggcggagggctggaccctcgtcgacgacgcg
gccgaggccgacgtcgccgtcgtcaacacgtgcgggttcatcgagcaggccaagaaggac
tcgatcgacgcgatcctcgaggcgaacgacctgcgtgagcacggacgcacgcagaaggtc
gtggcggtcggctgcctcgccgagcgctacggcaaggagctggcggacgagctgcccgag
gccgacgcggtcctcggcttcgactcgtatgccgacatgtccagccacctgcgagcggtc
ctcgacgggcacgcccccgaggcccataccccgggcgaccgccgcaggctgctgccgatc
tccccggtcgagcgggacgcgagcgagctctccgtgccgggtcacggcgctggtgacctc
ccgcgcgcccgtctcgacgacaagccgtgggcgccgctgaagatcgcctctggctgcgac
cggcgctgcgccttctgcgccatcccggccttccgcggcgccttcgtctcgcgccgcccg
agcgacgtcgtggccgaagggaggtggctcgccacccagggcgtgcgtgagctcttcctc
gtgagcgagaactccacgtcctacggcaaggacctcggcgacctcgacctcctcgagcag
gtcctgcccgagctgaccacgatcgagggcatcgagcgcgtccgggtgtcctacctgcag
cccgccgagatccgccccggcctgctgcgggcgatggcgagcaccgagggtgtggtgccg
tggtacgacatctccttccagcacgcctccggtccgctgctgcggcggatgcgccgcttc
ggtgacaccgactccttcctcggcctcatcgagggcatccgtgagcgccagcccgaggcc
ggcatccgctccaacgtcatcgtcgggttccccggggagaccgaggaggacgtcgccgag
ctcgagcgcttcctcgtcggggcgcggctcgacgtggtcggggtcttcgggtactccgac
gaggacggcaccgagggcgagctgctcacagacaagatcgaccccgatgtcatcgccacg
cgggtcgaccgcctcacccggctcgtggaggagctcaccgcgcagcgtgccgaggagcgc
atcggccaggtcgtcgaggtgctcgtcgaggacgtcgacgaggagagcggtgaggtgagc
ggccgcgccgcgcaccagggccccgacgtcgacggcgtcacgctgctgaccggtgcgctc
gagggtgtcgagatcggcgccttcgtcgctgccgaggtggtcggcaccgagggcatcgac
ctcgtcgcggaggtcctggcgtga
DBGET
integrated database retrieval system
