Janibacter terrae: V3C34_13400
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Entry
V3C34_13400 CDS
T10608
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jtr Janibacter terrae
Pathway
jtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V3C34_13400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jtr03019
]
V3C34_13400
03016 Transfer RNA biogenesis [BR:
jtr03016
]
V3C34_13400
Enzymes [BR:
jtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V3C34_13400
Messenger RNA biogenesis [BR:
jtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V3C34_13400
Transfer RNA biogenesis [BR:
jtr03016
]
Prokaryotic type
tRNA degradation factors
V3C34_13400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
XAS59916
LinkDB
All DBs
Position
complement(2710989..2713418)
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AA seq
809 aa
AA seq
DB search
MEGPEIQFAEATIDNGQFGTRTVRFETGRLAKQAGGAVVAYLDGETMLLSTTTAGKTPKD
HFDFFPLTVDVEERMYAAGRIPGSFFRREGRPGTDAILTCRLIDRPLRPTFKKGLRNEVQ
VVISVLSVHPDHQYDVLAINAASASTQISGLPFSGPIGAVRVSLIDGQWVAFPNFSDIER
STFDMVVAGRIAGDDVAIMMVEAESTESTWNLVKNEGKTAPTEEVVAEGLEASKQFIKVL
CDAQADLAAKAAKPVEDFPIFLDYQDDAYAAVEAATSADLATALTIAGKVEREDRLDEIK
DAMKASLAGTEEAPGEFFGRDKELSAAYRSVQKAQVRQRILRDKVRIDGRGLADIRALGA
EVEVLPRVHGSALFERGETQIMGVTTLNMLKMEQQIDSLSPVTKKRYMHNYNFPPYSTGE
TGRVGSPKRREIGHGALAERALMPVLPPREEFPYAIRQVSEALSSNGSTSMGSVCASTLS
LLNAGVPLRAPVAGIAMGLVSDEVDGQTQYAALTDILGAEDAFGDMDFKVAGTREFVTAI
QLDTKLDGIPASVLGGALTQARDARLHILDVMNEAIDTPDEMAPTAPRIITVQVPVDKIG
EVIGPKGKMINQIQDDTGADISIEDDGTVFIGAVDGPSADAARNAINAIANPQMPEVGER
FLGTVVKTTTFGAFVSLLPGKDGLLHISEVRKLVGGKRIDAVEDILGIGQKVQVELKEID
PRGKLSLAAVLTPEQEAEMASGGDDEGGRGGRREGGRDGGREGGRDGGREGGRDGGRRRR
RRGDDEASESGPASVSGSGSDESGAAQDD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcctgagatccagttcgccgaggccacgatcgacaacggccagttcggcacc
cgcacggtccggttcgagaccgggcgcctcgccaagcaggccggcggcgccgtcgtcgcc
tacctcgacggcgagaccatgctcctgtcgaccacgacggccggcaagaccccgaaggac
cacttcgacttcttccccctgacggtggacgtcgaggagcgcatgtacgccgcgggtcgc
atcccgggcagcttcttccgccgtgagggtcgtcccggcacggacgccatcctcacctgc
cgtctgatcgaccgcccgctgcgccccaccttcaagaagggtctgcgcaacgaggtccag
gtcgtcatctccgtcctgtccgtccacccggaccaccagtacgacgtgctcgcgatcaac
gcggcatccgcgtccacccagatctccggtctgcccttctcgggcccgatcggtgcggtg
cgcgtctcgctcatcgacggccagtgggtcgccttcccgaacttcagcgacatcgagcgc
tcgaccttcgacatggtcgtcgcaggccgcatcgcgggtgacgacgtcgcgatcatgatg
gtcgaggccgagtccaccgagtccacgtggaacctcgtgaagaacgagggcaagaccgcc
ccgaccgaggaggtcgtggccgagggcctcgaggcctccaagcagttcatcaaggtcctg
tgcgacgcccaggccgacctcgctgccaaggccgcgaagccggtcgaggacttcccgatc
ttcctcgactaccaggacgacgcctacgccgccgtcgaggctgcgacctccgcggatctc
gcgaccgcgctgacgatcgccggcaaggtcgagcgcgaggaccggctcgacgagatcaag
gacgccatgaaggcctccctcgcgggcaccgaggaggctcccggcgagttcttcggtcgg
gacaaggagctgtccgccgcctaccgctccgtgcagaaggcgcaggtccgccagcgcatc
ctgcgcgacaaggtccgcatcgacggccgtggcctcgccgacatccgcgccctcggcgcg
gaggtcgaggtgctgccgcgcgtccacggctcggcgctcttcgagcgcggcgagacccag
atcatgggtgtcaccacgctcaacatgctcaagatggagcagcagatcgactcactgagc
ccggtcaccaagaagcgctacatgcacaactacaacttcccgccctactcgaccggtgag
accggccgggtcggcagcccgaagcgccgcgagatcggccacggagcgctcgccgagcgt
gcgctcatgccggtgctgccgccccgcgaggagttcccctacgcgatccgtcaggtctcc
gaggcgctgagctccaacggctcgacctcgatgggctccgtctgcgcctccaccctgtcg
ctgctcaacgccggtgtgccgctgcgcgcgccggtcgccggcatcgccatgggcctggtc
tccgacgaggtcgacggccagacgcagtacgcggcgctgaccgacatcctcggcgccgag
gacgccttcggcgacatggacttcaaggtcgccggtacccgtgagttcgtcacggccatc
cagctcgacaccaagctcgacggcatccccgcctccgtgctcggtggcgcgctcacccag
gcccgcgacgcgcgtctgcacatcctcgacgtcatgaacgaggccatcgacaccccggac
gagatggcgccgaccgcgccgcgcatcatcaccgtccaggtccccgtcgacaagatcggt
gaggtcatcggcccgaagggcaagatgatcaaccagatccaggacgacaccggcgccgac
atcagcatcgaggacgacggcaccgtcttcatcggtgcggtcgacggcccgtccgcggac
gccgcgcgcaacgcgatcaacgcgatcgccaacccgcagatgcccgaggtcggtgagcgc
ttcctcggcaccgtcgtcaagacgacgaccttcggtgccttcgtctcgctcctgccgggc
aaggacggcctgctgcacatctccgaggtgcgcaagctcgtcggcggcaagcggatcgac
gcggtcgaggacatcctcggcatcggccagaaggtccaggtcgagctcaaggagatcgac
ccgcgcggcaagctcagcctcgccgccgtcctcacccccgagcaggaggccgagatggcc
tccggcggtgacgacgagggtggtcgtggcggtcgccgtgagggtggtcgcgacggtggt
cgtgagggtggccgcgacggcggtcgtgagggtggccgcgacggcggtcgccgtcgtcgc
cgccgcggtgacgacgaggccagcgagtcgggccccgcgtccgtgtccgggtcgggctcc
gacgagtccggtgctgctcaggacgactga
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