Janibacter terrae: V3C34_15325
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Entry
V3C34_15325 CDS
T10608
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
jtr Janibacter terrae
Pathway
jtr00521
Streptomycin biosynthesis
jtr00523
Polyketide sugar unit biosynthesis
jtr00541
Biosynthesis of various nucleotide sugars
jtr01100
Metabolic pathways
jtr01110
Biosynthesis of secondary metabolites
jtr01250
Biosynthesis of nucleotide sugars
Module
jtr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V3C34_15325 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
V3C34_15325 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
V3C34_15325 (rfbC)
Enzymes [BR:
jtr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
V3C34_15325 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
XAS60286
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Position
complement(3080804..3081370)
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AA seq
188 aa
AA seq
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MDVTHTSLPGVLVLTPTPYRDDRGFFSRTFDAEVVASAGIDPHGFVQDSVSRSRQGVVRG
LHVRTGAGEAKLVRCSRGAIFDVVVDLRPGSPTYLTWLSFDLDDETPRSVYIPAGCAHGF
QALTEPADITYRIDREHDPSEDLTISFRDPRLDIPWPLPVTLASAKDLDAPLLEQLEGRL
ATIAPAPR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcacgcacacgtcgctccccggggtcctggtcctcacgcccaccccgtaccgg
gacgaccgcgggttcttctcccgcaccttcgacgccgaggtcgtggcctcggccggcatc
gacccgcacgggttcgtccaggactccgtctcccggtcgcggcagggggtcgtgcggggc
ctgcacgtgcggaccggggccggcgaggcgaagctggtccgctgctcgcggggcgccatc
ttcgacgtcgtcgtcgacctgcgacccggctcgccgacgtacctgacctggctctccttc
gacctcgacgacgagacgccacgctcggtgtacatcccggcggggtgtgcccacgggttc
caggcactcaccgagccggcggacatcacgtaccggatcgaccgtgagcacgacccgtcc
gaggacctgacgatctccttccgcgacccccggctcgacatcccgtggccgctgcccgtg
accctggcctcggccaaggacctcgacgcgccgctgctggagcagctggagggacggctg
gcgacgatcgcccccgcgccgcgctga
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