Janibacter terrae: V3C34_16860
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Entry
V3C34_16860 CDS
T10608
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jtr Janibacter terrae
Brite
KEGG Orthology (KO) [BR:
jtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jtr03032
]
V3C34_16860 (topA)
03400 DNA repair and recombination proteins [BR:
jtr03400
]
V3C34_16860 (topA)
Enzymes [BR:
jtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V3C34_16860 (topA)
DNA replication proteins [BR:
jtr03032
]
Prokaryotic type
DNA Topoisomerases
V3C34_16860 (topA)
DNA repair and recombination proteins [BR:
jtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V3C34_16860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XAS60580
LinkDB
All DBs
Position
complement(3379639..3382371)
Genome browser
AA seq
910 aa
AA seq
DB search
MASKLVIVESPAKAKTIAGYLGGDYVVEASVGHIRDIPTPSEMPAEMKKGPFGRFGVNVE
DGFEPYYVVDPDKKKKVTELKRLLKDADTLYLATDEDREGEAIAWHLLETLKPKVPVKRM
VFHEITKEAIQRAVTETRDLDLDLVNAQESRRILDRLYGYEISPVLWRKVKAGLSAGRVQ
SVATRIVVERERERMAFKVASYWSVEGSFSAGSAPFAARLASLDGTKVATGSDFDDTGSL
KGTARQLDERAATTVAEATIAASVTVSSVSEKPYTRRPYAPFTTSTLQQEAGRKLGLGSR
AAMGVAQKLYENGYITYMRTDSTNLSGSAVAAARGQARDMYGADFVPEQPRVYGKKAKNA
QEAHEAIRPAGDRFRTPAQVAGELRGDEFRLYELIWKRTIASQMADAKGSTATIRLAADL
GGCEVATAAEYSASGTVITFKGFLAAYEEGTDEPRESTKDGEARLPKVTEGTAVDVVDAT
PNGHETSPPARYTEASLVKKMEELGIGRPSTYASTISTIQDRGYVRKKGSALVPTWLAFA
VTRLMEVHFSSLVDYRFTASMEEDLDEIASGSAERVAWLQRFYYGSEGGGQGLHELVTDL
GDIDARAISTIDIGDGVVVRVGRYGPYVEEVVSTSETPRRATINDDVAPDELTPAMAREY
LAQAADDGRVLGQDPETGRDVIVKTGRYGPFVTEVLEEDAEDKPKRGKAKVKPRTASLFA
SMDPATVELDTALQLLSLPRTVGTVTETKTAEDGTETQVEVPITAQNGRYGPYLKKGTDS
RSLETESQIFAITLEEALAIYAQPKQRGRAAAKPPLAEFGEDPVSGKKVVVKDGRFGPYV
TDGETNATLRRDDEPETLTAARAYELIAEKRAKGPATRKKSAKKTAKKTVKKAAKKTTKA
GAKKAATKKA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaagctcgtcatcgtggagtcccccgccaaggcgaagaccatcgccggctac
ctcggcggcgactacgtcgtcgaggcgtccgtcgggcacatccgcgacatccccacgccc
tccgagatgcccgcggagatgaagaaggggcccttcggccgcttcggcgtcaacgtcgag
gacggcttcgagccgtactacgtcgtggacccggacaagaagaagaaggtcaccgagctc
aagcgcctgctcaaggacgccgacaccctctacctcgccaccgacgaggaccgcgagggc
gaggcgatcgcctggcacctcctggagaccctcaagcccaaggtccccgtcaagcggatg
gtcttccacgagatcaccaaggaggcgatccagcgggccgtcaccgagacccgtgacctc
gacctcgacctcgtcaacgcccaggagtcgcgccgcatcctcgaccgcctctacggctac
gagatctcgcccgtcctgtggcgcaaggtcaaggccggactgtccgccgggcgcgtgcag
tccgtggcgacccgcatcgtcgtcgagcgcgagcgcgagcggatggccttcaaggtggcc
tcgtactggagcgtcgagggcagcttctccgccgggtccgcccccttcgccgcccgcctc
gccagcctggacgggaccaaggtcgcgaccggctccgacttcgacgacaccggttcgctc
aagggcaccgcccgccagctcgacgagcgcgccgcgaccacggtcgccgaggcgacgatc
gccgcgtccgtcacggtctcctcggtcagcgagaagccgtatacccgccggccgtacgcc
cccttcacgacctcgacgctgcagcaggaagccggtcgcaagctcggcctcggctcgcgc
gcggcgatgggcgtcgcgcagaagctgtacgagaacggctacatcacgtacatgcgtacc
gacagcaccaacctctccggctcggccgtcgccgcagcccgggggcaggcgcgcgacatg
tacggcgcggacttcgtccccgagcagccgcgcgtgtacggcaagaaggcgaagaacgcg
caggaggcgcacgaggcgatccgccccgcgggggaccgcttccgcaccccggcgcaggtc
gccggcgagctgcgcggcgacgagttccggctctacgagctgatctggaagcgcacgatc
gcctcccagatggccgacgccaagggctcgaccgcgacgatccggctggccgccgacctc
ggcggctgcgaggtcgccaccgccgccgagtactccgcgtccggcaccgtcatcaccttc
aagggtttcctcgccgcgtacgaggagggcaccgacgagccccgcgagtccacgaaggac
ggcgaggcccggctgccgaaggtcaccgagggcaccgcggtcgacgtcgtcgacgcgacc
ccgaacggccacgagacctcgccgccggcgcgctacaccgaggcctcgctcgtgaagaag
atggaggagctcggcatcggccgcccctccacgtacgcctcgacgatcagcacgatccag
gaccgcgggtacgtccgcaagaagggcagcgccctcgtcccgacgtggctggccttcgcg
gtcacccgcctcatggaggtgcacttcagcagcctcgtcgactaccgcttcaccgcctcg
atggaggaggacctcgacgagatcgcgtccggctccgcggagcgggtggcgtggctgcag
cgcttctactacgggagcgaagggggcggccagggcctgcacgagctggtcaccgacctc
ggtgacatcgacgccagggcgatctccacgatcgacatcggcgacggcgtcgtcgtgcgg
gtggggcgctacggcccgtacgtcgaggaggtcgtctcgacctcggagaccccgaggcgc
gcgacgatcaacgacgacgtcgcgcccgacgagctgaccccggcgatggcccgcgagtac
ctcgcgcaggccgccgacgacgggcgcgtcctcgggcaggacccggagaccggccgcgac
gtcatcgtcaagaccggccgctacggccccttcgtcaccgaggtgctcgaggaggacgcc
gaggacaagccgaagcggggcaaggccaaggtcaagccgcgcaccgcctccctcttcgcg
tcgatggacccggccacggtcgagctcgacaccgccctgcagctgctgtcgctgccgcgc
accgtgggcaccgtcaccgagaccaagaccgccgaggacggcaccgagacgcaggtcgag
gtgcccatcaccgcgcagaacggtcgctacggcccgtacctgaagaagggcaccgactcg
cgctccctcgagaccgagtcgcagatcttcgcgatcacgctcgaggaggccctggcgatc
tacgcccagcccaagcagcgcgggcgggccgcggccaagccgccgctggccgagttcggc
gaggacccggtgagcggcaagaaggtcgtcgtcaaggacgggcgcttcggcccgtacgtc
accgacggtgagacgaatgccacgctgcgacgtgatgacgagcccgagacgctcaccgcg
gcacgggcctacgagctcatcgccgagaagcgtgccaagggccccgcgacccgcaagaag
tcggcgaagaagacggccaagaagaccgtgaagaaggccgcgaagaagacgacgaaggca
ggagccaagaaggccgcgaccaagaaggcgtga
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