Jeongeupia wiesaeckerbachi: R0382_000723
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Entry
R0382_000723 CDS
T11114
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
jwk Jeongeupia wiesaeckerbachi
Pathway
jwk02020
Two-component system
jwk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
R0382_000723
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
R0382_000723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jwk03021
]
R0382_000723
Transcription machinery [BR:
jwk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
R0382_000723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
DUF3253
Motif
Other DBs
NCBI-ProteinID:
XVK49290
LinkDB
All DBs
Position
complement(742510..743934)
Genome browser
AA seq
474 aa
AA seq
DB search
MKQSLQLRLSQQLNLTPQLQQSIKLLQLSTLDFQQEVERFLAENPLLERGEDQHSSSDGE
GSAEAPAEASSSDDAPASESAFDNDDWGWEGSGGGARSGGDDDDDFDPASNIARELTLRE
HLLAQAGLLPIPLRDRAALTWLIDALDDDGFLTQPLEEILALLPAELAGGFEFELDDLTI
ALARLKQLEPLGVGARDMAESLALQLAALAVSDVRQLALGIVRDSLDLLAARDYTRLKRR
LKCDEAALKAAQALIVSLNPRPGAQWSDESSHYVVADVLVSKYKGQWRVRLNDAARPKLR
VNRMYADILQRSDGGVLARELQEAKWLVKSVQQRFDTILRVGQAIVDKQRAFFEHGEIAM
RPLVLRDIASELDLHESTVSRVTTQKYMLTPRGIFEFKYFFGSHVETEAGGEASATAIKA
QIRQLLQQEDKQKPLSDSAIAEALAGQGVVVARRTVAKYREAMQIPPVNLRKCL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcgctgcaacttcgcctctcccagcagctcaatctgacgccgcagctgcag
caatcgatcaagctgctgcagctgtcgacgctcgatttccagcaggaagtcgagcgattc
ctggccgaaaatccgttgcttgagcgcggtgaggatcaacattcttcgtccgacggggaa
gggagtgccgaagcgccggccgaggccagcagcagcgacgatgcaccagcaagcgaatcg
gcgttcgacaacgacgattggggctgggaaggcagtggtggcggcgcgcgcagcggcggt
gacgacgatgacgatttcgacccggccagcaatatcgcccgtgagctgaccttgcgcgag
cacctgctggcgcaagccggcttgttgccgattccgttgcgcgatcgggccgcgctgacg
tggctgatcgatgcgctcgacgacgacggtttcctgacccagccgctcgaagaaattctt
gcgctgctgcctgcggaacttgccggcgggttcgagttcgaactcgatgacctgacgatc
gcgctggcgcggctcaagcagctcgaaccgctcggcgtcggtgcccgggacatggccgaa
tcgctggctttgcaactggcggcattggcggtatctgacgtgcgtcaactggcgctgggt
atcgtgcgggacagtctcgatttgctcgcggcacgggactacactaggttaaaacgccgc
ctgaaatgcgatgaagcggccctgaaggccgcacaggccttgatcgtcagcctgaatccg
cgaccaggcgcacagtggagcgacgaatcgtcgcattatgtggtggccgacgtattggtc
agcaagtacaaggggcagtggcgagtgcgcttgaacgacgcggccagacccaagctcagg
gtcaaccggatgtacgccgatatcctgcaacgcagcgatggcggagtgctggcgcgcgag
ctgcaggaagccaaatggctggtcaagagcgtgcagcagcgtttcgataccatcctgcgg
gttggacaggccatcgtcgacaagcagcgcgccttcttcgagcacggtgaaatcgcgatg
cggcccctggtgctgcgcgacatcgcctccgagctcgacctgcacgaatccaccgtctcc
cgtgtcacgacgcagaagtacatgctgacgccgcgtggtatcttcgaattcaagtatttt
tttggcagtcatgtcgaaaccgaagccggcggcgaagcctcggcgacggcgatcaaggcg
cagattcgtcaactgctccagcaggaagacaagcaaaaaccattgtcggacagtgccatc
gcggaagcgctggcagggcaaggggtcgtggttgcgcgacgaaccgttgccaaatacagg
gaggcgatgcaaatccctcccgtcaatctgcgcaaatgcctgtaa
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