Jeongeupia wiesaeckerbachi: R0382_001848
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Entry
R0382_001848 CDS
T11114
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jwk Jeongeupia wiesaeckerbachi
Pathway
jwk03030
DNA replication
jwk03430
Mismatch repair
jwk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0382_001848
03430 Mismatch repair
R0382_001848
03440 Homologous recombination
R0382_001848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jwk03032
]
R0382_001848
03400 DNA repair and recombination proteins [BR:
jwk03400
]
R0382_001848
Enzymes [BR:
jwk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0382_001848
DNA replication proteins [BR:
jwk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R0382_001848
DNA repair and recombination proteins [BR:
jwk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R0382_001848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
UvrC_M
GIY-YIG_UvrC
RNase_H_2
GIY-YIG
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XVK50386
LinkDB
All DBs
Position
1911160..1912596
Genome browser
AA seq
478 aa
AA seq
DB search
MFPFREALNRVTNPYYSEPLVFVDLETTGATPASDRITEIGIVQVDDDGVRRWSSLVNPQ
QPIPPFIQRLTGIDDAMVADAPTFAELAETVLAKLQGRVFVAHNARFDYGFLKQECQRLG
LRFSAPVLCTVKLSRKLYPKEFKHSLDALVARHGLAIDGDRHRALSDAALLPAFLDVALR
EHPVEVVQQAIAELLRQPRIPAGLDPAVIDELPETGGCYTFYAIEGAALLVGRSHNIRKR
VLQHFAADARKPRELEMLGKLTRIDWREAAGEFGAMLDEARLIRTLKPVYNPRPKKSTGA
CVLRLSEHDRALIPEVVDLAALGQIDPQRDFVFGPFRARRDAQRLLDKLADGTGLCRQLL
GLEPRPVVAAPCSAQPLGKCRGACIGHEPLATHNARLLSLLAKHSFADWPYPGPVGLVEG
PEWAPEIHVIDRWCHLGVIHEAAELGALQAAGPAEFDFDAYKLIQFELKRRAGEVLRF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgtttccgtttcgtgaagcgctgaatcgcgtgaccaatccctactacagcgaaccgctg
gttttcgtcgatctcgaaaccaccggcgccacaccggcgagcgaccggatcaccgagatc
ggtattgtccaggtcgatgacgacggcgtgcggcgctggtccagcctcgtcaatccgcag
cagccgattccgccgttcatccagcggctgaccgggatcgacgacgccatggtcgccgat
gcgccgaccttcgccgaactggccgaaacggtgctggccaagttgcaaggccgggtcttt
gtcgcccacaacgcccgcttcgactatggctttctgaagcaggaatgccagcggctggga
ttgcgtttttcggcgccggtgctgtgcacggtcaagttgtcgcgcaagctctatccgaag
gaattcaagcacagcctcgacgcgctggttgcccggcacggtctggcgatcgacggcgat
cgccatcgcgcgctgagcgatgccgcgctgctgccggcctttctcgacgttgccttgcgc
gagcatccggtcgaagtggtgcagcaggccatcgccgagttgttgcgccagccgcggata
ccggccggcctcgatccggcggtgatcgacgagctaccggaaaccggcggttgctatacc
ttctacgccatcgagggcgccgccttgctggtcggccgcagtcacaacatccgcaagcgg
gtgctgcagcatttcgccgccgatgcacgcaagccgcgcgagctggaaatgctgggcaag
ctgacgcgcatcgactggcgcgaagcggccggcgaatttggcgcgatgctcgacgaagcg
cggctgatccgcacgctcaaaccggtgtacaatccgcgtccgaagaaaagtaccggcgcc
tgcgtgctgcggctgagcgagcacgatagggcgctgattccggaggtcgtcgatctggcg
gccctggggcagatcgatccgcagcgcgacttcgtcttcggcccgttccgcgcgcgccgc
gatgcgcagcgcctgctcgacaagctggccgacggcaccggcctgtgccggcaactgctc
gggcttgagccgcgcccggtcgtggcagcgccgtgcagcgcccagcccttgggaaaatgc
cggggggcgtgcatcggccacgagccgctggcgacgcacaacgcccggctgttgtccttg
ctggccaagcacagctttgctgactggccgtacccgggtccggtgggcttggtcgaaggc
ccggaatgggcgcccgagattcacgtcatcgaccgctggtgccatctcggcgtgatccac
gaggctgccgagctgggggcgctgcaggctgcggggccggcagaattcgatttcgatgcc
tacaagctgatccagttcgaactcaagcgccgcgccggcgaagtgttgcgcttttag
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