Jeongeupia wiesaeckerbachi: R0382_002749
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Entry
R0382_002749 CDS
T11114
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jwk Jeongeupia wiesaeckerbachi
Pathway
jwk03030
DNA replication
jwk03430
Mismatch repair
jwk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jwk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0382_002749 (dnaE)
03430 Mismatch repair
R0382_002749 (dnaE)
03440 Homologous recombination
R0382_002749 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jwk03032
]
R0382_002749 (dnaE)
03400 DNA repair and recombination proteins [BR:
jwk03400
]
R0382_002749 (dnaE)
Enzymes [BR:
jwk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0382_002749 (dnaE)
DNA replication proteins [BR:
jwk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R0382_002749 (dnaE)
DNA repair and recombination proteins [BR:
jwk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R0382_002749 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
tRNA_anti_2
DUF3173
T2SSK
Motif
Other DBs
NCBI-ProteinID:
XVK51257
LinkDB
All DBs
Position
complement(2803754..2807191)
Genome browser
AA seq
1145 aa
AA seq
DB search
MNQPAFIHLRLHSEFSVTDGIVRIDDAVKHAQKLGMPALGVSDLMNLFGLVKHYKACRSA
GIKPIVGLDAWIENEADRDKPFRVLLLARDRDGYGRLCELLTRAYRDNQYRDRAELRKDW
IAEGDNSHLLCLSGGHQGEIGQTLLSGNYDAAKAVAQWWSGQFAGNFYLELQRSGQSECE
PCVQGQLDIASDLDLPVVATHPIQFMAADDFKAHEARVCIAEGYMVADKRRPKLFTDDQY
FKTPAEMAELFADLPEALANSVAIAQRCNLSVTLGKNYLPDFPTPDGMTLDDYLVHLAKE
GLESRLALLYPDVAARDAERPRYLDRLKFETDTIIQMGFPGYFLIVADFIVWAKQNGCPV
GPGRGSGAGSLVAYSLGITDIDPTAYALLFERFLNPERVSMPDFDIDFCQDNRWRVIEYV
REKYGAEAVSQIATFGTMAAKAVVRDVGRVLDLPYMFCDGLSKMIPAAPGKHFSLDDAVE
MVPELAERVRNEDEVKELWELALKLEGMTRNIGMHAGGVLIAPGQITDFCPVYQASGVDA
SPVSMLDKDDVESIGLVKFDFLGLRNLTIIELALQYIKEQTGEYLDLMSLGFEDQAAYQV
FRDANTTAVFQVESDGMKRLLEKLQPDRFEDIIAVLALYRPGPLGSGMVDTFINRKKGLE
VPDYFHPDLERCLEPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPEEMAKHR
EMIADGAKKKGYDPQLAEMLFDLMAKFAEYGFNKSHTAAYAVVSYHTAWLKAHHTAAFMA
ATMSSELDNTDQLKIFYDDCIEKNRLEMLPPDINESVYRFVPVGKRQIRYALGAIKGVGQ
GAVEQIVAERKANGPFKDLYDFCRRTDKKEVNKRVLEALIRGGAFDAIDDHRARLMANVE
QAMKLAEAEAANANQNSLFDIFEPSAVPTVEPIETARWDDKVKLAEEKTALGHYLSGHPF
DAHAKDLKGLIKTRLDRLEPKRELQYLAGIVGGLRIKNGDRGRMAFLQLDDGNAKIEVAL
YSEVFEAQRTKLKDDTLLVVAGKVSEDRFSGGLRVIADAVMDVAEARSHFARSLNLQING
NADAARLTSLLTTHGGGACAVEIDYRTQGARCALRLGLDWRVTLHDALIAELQAWLGNDA
VKIRF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagcccgcctttatccatctccgcctgcactccgaattctctgtgaccgacggc
atcgtccggatcgacgacgccgtcaagcatgcccaaaaactcggcatgcccgcgctcggc
gtgtccgacctgatgaacctgtttggtctggtcaagcactacaaagcctgccgcagcgca
gggatcaagcccatcgtcggtctggatgcctggatcgagaacgaggcggatcgcgacaag
ccgttccgcgtgctgctgctagcgcgcgatcgcgacggctacggccgcttatgcgagctg
ctgacgcgcgcgtatcgcgacaatcagtaccgcgaccgcgccgagctgcgcaaggactgg
attgccgagggcgacaacagccatctgctgtgcctgtcgggtgggcatcagggcgaaatc
ggccagacactgctgtccggcaactacgacgcggccaaggccgtcgcgcagtggtggagc
gggcagttcgccggcaacttctatctggagctgcagcgcagtggccagtccgagtgcgaa
ccgtgcgtgcagggtcagctcgacatcgcctccgatctcgacctgccggtcgtcgccacg
cacccgatccagttcatggcggcggacgacttcaaggcgcacgaggcgcgcgtctgcatt
gccgaaggctatatggtcgccgacaagcgccggcccaagctgttcaccgacgaccagtac
ttcaagacaccggccgagatggccgaactgtttgccgacctgcccgaagcgctggccaat
tcggtcgcgatcgcgcagcgttgcaatctgagcgtcacgctcggcaagaactacctgccg
gacttccctacgcccgacggcatgacgctggacgactatcttgtccacctcgccaaggaa
ggactcgaatcgcggctggcactgctgtatccggacgtcgccgcccgcgatgccgaacgc
ccgcgctatcttgatcgcctgaagttcgagaccgacaccatcatccagatgggtttcccg
ggctacttcctgatcgtggccgacttcattgtctgggccaagcaaaacggttgtccggtc
ggcccgggccggggttcgggcgccggttcgctggtggcgtattcgctcggcattaccgac
atcgacccgactgcgtacgcgctgctgttcgaacgtttcctgaacccggaacgggtctcg
atgcccgacttcgacatcgacttctgccaggacaaccgctggcgcgtgatcgagtacgtg
cgcgagaagtatggcgccgaggcagtcagccagatcgccaccttcggcaccatggccgcc
aaggccgtggtgcgcgacgtcggccgcgtgctcgacctgccttatatgttctgcgacggt
ttgtcgaagatgattccggccgcgccgggcaagcatttcagcctcgacgacgcggtcgag
atggtgcccgagctggccgagcgcgtccgcaacgaggacgaagtcaaggagctgtgggag
ctggcgctcaagctcgaaggcatgacccgcaatatcggcatgcacgccggcggcgtgctg
atcgcgccgggccagatcaccgatttctgcccggtctatcaggccagtggcgtcgatgcg
tcgccggtgtcgatgctcgacaaggacgacgtcgagtcgatcgggttggtgaagttcgac
tttctgggcctgagaaacctgacgattatcgagctggcgctgcagtacatcaaagagcag
accggcgagtatctcgacctgatgagcctgggtttcgaggatcaggccgcctatcaggtt
ttccgcgacgccaacaccaccgccgtcttccaggttgaatcggacggcatgaagcggctg
ctcgaaaagctgcaacccgaccgtttcgaagacatcatcgccgtgctggcgctgtatcgt
ccgggcccgctcggttcgggcatggtcgacaccttcatcaaccgcaagaagggcctggaa
gtccccgattacttccaccccgacctggagcgctgcctcgaaccgacttacggcgtgatc
gtgtatcaggaacaggtgatgcagatttcgcagatcatcggcggctatacgctgggcggc
gccgacatgctgcggcgcgccatgggcaagaagaagcccgaagagatggccaagcaccgc
gagatgatcgccgacggtgcaaagaagaaaggctacgaccctcagctcgcagaaatgctg
ttcgacctgatggccaagtttgccgagtacggcttcaacaagtcgcacacggcggcgtac
gcggtggtgtcgtaccacaccgcgtggctgaaggcgcatcacaccgcggcgttcatggcc
gcgacgatgagctcggaactcgacaacaccgaccagctgaagatcttctacgacgactgc
atcgagaaaaaccggctggaaatgctgccgcccgacatcaacgaaagcgtttaccgcttc
gtcccggtcggcaagcgacaaatccgctatgcgctcggcgcaatcaagggcgtgggtcag
ggggcggtcgaacagatcgtcgccgagcgcaaggccaacggcccgttcaaggacctgtac
gatttctgccggcgcaccgacaagaaggaagtcaacaagcgcgtactcgaggcgctgatt
cgtggcggtgccttcgacgccatcgatgaccaccgcgcacggctgatggccaatgtcgag
caggcgatgaagctggccgaagccgaggccgccaacgccaaccagaactcgctgttcgac
atcttcgagccatcggccgttccgacggtcgagccgatcgaaaccgcgcgctgggacgac
aaggtcaagcttgccgaagagaaaaccgcgctcggtcactacctatcgggtcatccgttc
gatgcgcacgccaaggacctgaaaggcctgatcaagacccggctcgaccggctcgagccc
aagcgcgagctgcaatacctcgccggcattgtcggtggcctgcggatcaagaacggcgat
cgtggccggatggcctttttgcagctcgacgacggtaacgccaagatcgaagtggcgttg
tactcggaagtcttcgaggcgcagcgcaccaagctcaaggacgacacgctgctggtcgtc
gccggcaaggtcagcgaggaccgcttttcgggcggcctgcgcgtgatcgccgacgcggtg
atggatgtcgcagaagcgcgcagccacttcgcgcgctcgctcaatctgcagatcaacggc
aatgccgacgctgcgcgcctgacctcgctgctgaccacgcacggcggcggcgcctgcgcg
gtcgagatcgactaccgcacccagggcgcgcgctgcgcgctgcgactggggctcgactgg
agggtgacgctgcacgacgcactgatcgccgaactgcaggcgtggctgggtaacgatgca
gtaaaaatccgtttctga
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integrated database retrieval system
